RNA–Protein interactions for RNA: ENST00000373825.6

SRPK1-204, Transcript of SRSF protein kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRPK1, Length 4,592 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRPK1-204ENST00000373825 SAAL1Q96ER3 474 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 NUCKS1Q9H1E3 243 aaKnown RBP17.43■□□□□ 0.38
SRPK1-204ENST00000373825 SAMD15Q9P1V8 674 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 SERPINA10Q9UK55 444 aa17.43■□□□□ 0.38
SRPK1-204ENST00000373825 ZNF202O95125 648 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 CYLC1P35663 651 aaPredicted RBP17.42■□□□□ 0.38
SRPK1-204ENST00000373825 NAIF1Q69YI7 327 aaPredicted RBP17.42■□□□□ 0.38
SRPK1-204ENST00000373825 NCOA5Q9HCD5 579 aaKnown RBP17.42■□□□□ 0.38
SRPK1-204ENST00000373825 CDC23Q9UJX2 597 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 PHLPP2Q6ZVD8 1323 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 SGSM2O43147 1006 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 ELF1P32519 619 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 NMIQ13287 307 aaPredicted RBP17.42■□□□□ 0.38
SRPK1-204ENST00000373825 RASEFQ8IZ41 740 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 ARMC2Q8NEN0 867 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 GRIN2BQ13224 1484 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 TACC1O75410 805 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 SCP2P22307 547 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 PSMD2Q13200 908 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 FHOD1Q9Y613 1164 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 PTPRCP08575 1304 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 MTIF2P46199 727 aaKnown RBP17.42■□□□□ 0.38
SRPK1-204ENST00000373825 DPCR1Q3MIW9 517 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 KIAA1468Q9P260 1216 aa17.42■□□□□ 0.38
SRPK1-204ENST00000373825 NOP2P46087 812 aaKnown RBP17.41■□□□□ 0.38
SRPK1-204ENST00000373825 VPS16Q9H269 839 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 TOPBP1Q92547 1522 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 SNAPC4Q5SXM2 1469 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 DIXDC1Q155Q3 683 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 NUTM2AQ8IVF1 878 aaPredicted RBP17.41■□□□□ 0.38
SRPK1-204ENST00000373825 DONSONQ9NYP3 566 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 TRIM35Q9UPQ4 493 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 KIRREL3Q8IZU9 778 aa17.41■□□□□ 0.38
SRPK1-204ENST00000373825 UBLCP1Q8WVY7 318 aaPredicted RBP17.41■□□□□ 0.38
SRPK1-204ENST00000373825 ENC1O14682 589 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 CDC25BP30305 580 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 MICU3Q86XE3 530 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 PHACTR3Q96KR7 559 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 USP28Q96RU2 1077 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 FTOQ9C0B1 505 aaKnown RBP eCLIP17.4■□□□□ 0.38
SRPK1-204ENST00000373825 FANCLQ9NW38 375 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 HMGXB3Q12766 1538 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 RRAGBQ5VZM2 374 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 C8orf74Q6P047 294 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 CNGA4Q8IV77 575 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 CDK5RAP3Q96JB5 506 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 SEPT11Q9NVA2 429 aaKnown RBP17.4■□□□□ 0.38
SRPK1-204ENST00000373825 PPIP5K1Q6PFW1 1433 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 GUCY2FP51841 1108 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 NLRP12P59046 1061 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 SF3B2Q13435 895 aaKnown RBP17.4■□□□□ 0.38
SRPK1-204ENST00000373825 SLC35F6Q8N357 371 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 AIDAQ96BJ3 306 aa17.4■□□□□ 0.38
SRPK1-204ENST00000373825 TTF2Q9UNY4 1162 aaKnown RBP17.4■□□□□ 0.38
SRPK1-204ENST00000373825 HMGB1P09429 215 aaKnown RBP17.39■□□□□ 0.37
SRPK1-204ENST00000373825 ATP8B2P98198 1209 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 PDCLQ13371 301 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 ATP11AP98196 1134 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 GNPTABQ3T906 1256 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 C1orf141Q5JVX7 400 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 HIBCHQ6NVY1 386 aaPredicted RBP17.39■□□□□ 0.37
SRPK1-204ENST00000373825 PLA2G4DQ86XP0 818 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 TEX11Q8IYF3 940 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 UNC13AQ9UPW8 1703 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 ABCA10Q8WWZ4 1543 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 KLF18A0A0U1RQI7 1052 aa17.39■□□□□ 0.37
SRPK1-204ENST00000373825 GCOM1H8Y6P7 765 aaPredicted RBP17.38■□□□□ 0.37
SRPK1-204ENST00000373825 MYZAPP0CAP1 466 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 HNRNPH1P31943 449 aaKnown RBP17.38■□□□□ 0.37
SRPK1-204ENST00000373825 RANBP1P43487 201 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 LARGE1O95461 756 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 CCDC40Q4G0X9 1142 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 CTAGE1Q96RT6 745 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 POLD4Q9HCU8 107 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 TPCN1Q9ULQ1 816 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 POLE2P56282 527 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 UBXN1Q04323 297 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 SEPT14Q6ZU15 432 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 SIRT2Q8IXJ6 389 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 CCDC42Q96M95 316 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 ZHX3Q9H4I2 956 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 SUDS3Q9H7L9 328 aaPredicted RBP17.38■□□□□ 0.37
SRPK1-204ENST00000373825 HMG20BQ9P0W2 317 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 A6NNZ2 444 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 TADA3O75528 432 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 ANXA1P04083 346 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 ATP1A3P13637 1013 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 KRT9P35527 623 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 TUBB8Q3ZCM7 444 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 CACNA2D3Q8IZS8 1091 aa17.38■□□□□ 0.37
SRPK1-204ENST00000373825 NSRP1Q9H0G5 558 aaKnown RBP17.38■□□□□ 0.37
SRPK1-204ENST00000373825 LUC7L2Q9Y383 392 aaKnown RBP17.38■□□□□ 0.37
SRPK1-204ENST00000373825 INSRP06213 1382 aa17.37■□□□□ 0.37
SRPK1-204ENST00000373825 N4BP1O75113 896 aaKnown RBP17.37■□□□□ 0.37
SRPK1-204ENST00000373825 CORO7P57737 925 aa17.37■□□□□ 0.37
SRPK1-204ENST00000373825 KRT83P78385 493 aa17.37■□□□□ 0.37
SRPK1-204ENST00000373825 DDX46Q7L014 1031 aaKnown RBP17.37■□□□□ 0.37
SRPK1-204ENST00000373825 UNC5CLQ8IV45 518 aa17.37■□□□□ 0.37
SRPK1-204ENST00000373825 SAR1BQ9Y6B6 198 aa17.37■□□□□ 0.37
SRPK1-204ENST00000373825 ADGRF5Q8IZF2 1346 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms