RNA–Protein interactions for RNA: ENST00000372994.1

C9orf16-201, Transcript of chromosome 9 open reading frame 16, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf16, Length 713 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf16-201ENST00000372994 VGLL2Q8N8G2 317 aa18.81■□□□□ 0.6
C9orf16-201ENST00000372994 KLHDC4Q8TBB5 520 aa18.81■□□□□ 0.6
C9orf16-201ENST00000372994 HDAC5Q9UQL6 1122 aa18.81■□□□□ 0.6
C9orf16-201ENST00000372994 GYG1P46976 350 aa18.8■□□□□ 0.6
C9orf16-201ENST00000372994 CTCFP49711 727 aaPredicted RBP18.8■□□□□ 0.6
C9orf16-201ENST00000372994 HNRNPUQ00839 825 aaKnown RBP eCLIP18.8■□□□□ 0.6
C9orf16-201ENST00000372994 METTL24Q5JXM2 366 aa18.8■□□□□ 0.6
C9orf16-201ENST00000372994 INTS3Q68E01 1043 aaKnown RBP18.8■□□□□ 0.6
C9orf16-201ENST00000372994 IPO8O15397 1037 aaKnown RBP18.79■□□□□ 0.6
C9orf16-201ENST00000372994 AOC2O75106 756 aa18.79■□□□□ 0.6
C9orf16-201ENST00000372994 PTPN12Q05209 780 aaKnown RBP18.79■□□□□ 0.6
C9orf16-201ENST00000372994 FBXO33Q7Z6M2 555 aa18.79■□□□□ 0.6
C9orf16-201ENST00000372994 MTMR14Q8NCE2 650 aa18.79■□□□□ 0.6
C9orf16-201ENST00000372994 PRDM10Q9NQV6 1147 aa18.79■□□□□ 0.6
C9orf16-201ENST00000372994 EYA2O00167 538 aa18.78■□□□□ 0.6
C9orf16-201ENST00000372994 FKBP1BP68106 108 aa18.78■□□□□ 0.6
C9orf16-201ENST00000372994 RGMBQ6NW40 437 aa18.78■□□□□ 0.6
C9orf16-201ENST00000372994 SCAF8Q9UPN6 1271 aaKnown RBP18.78■□□□□ 0.6
C9orf16-201ENST00000372994 BCAR3O75815 825 aa18.77■□□□□ 0.6
C9orf16-201ENST00000372994 NOGQ13253 232 aa18.77■□□□□ 0.6
C9orf16-201ENST00000372994 DLGAP5Q15398 846 aa18.77■□□□□ 0.6
C9orf16-201ENST00000372994 FBXO3Q9UK99 471 aa18.77■□□□□ 0.6
C9orf16-201ENST00000372994 JAG2Q9Y219 1238 aa18.77■□□□□ 0.6
C9orf16-201ENST00000372994 TRIM27P14373 513 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 FGFR2P21802 821 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 PUM3Q15397 648 aaKnown RBP18.76■□□□□ 0.59
C9orf16-201ENST00000372994 CAVIN4Q5BKX8 364 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 ATG9AQ7Z3C6 839 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 CCDC102AQ96A19 550 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 MEIS3Q99687 375 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 BEGAINQ9BUH8 593 aa18.76■□□□□ 0.59
C9orf16-201ENST00000372994 LRRFIP2Q9Y608 721 aaKnown RBP18.76■□□□□ 0.59
C9orf16-201ENST00000372994 FAM155AB1AL88 458 aaPredicted RBP18.75■□□□□ 0.59
C9orf16-201ENST00000372994 F8W031 263 aaPredicted RBP18.75■□□□□ 0.59
C9orf16-201ENST00000372994 CIAO1O76071 339 aa18.75■□□□□ 0.59
C9orf16-201ENST00000372994 MFSD14BQ5SR56 506 aa18.75■□□□□ 0.59
C9orf16-201ENST00000372994 PRAMEF18Q5VWM3 479 aa18.75■□□□□ 0.59
C9orf16-201ENST00000372994 ATF7IPQ6VMQ6 1270 aa18.75■□□□□ 0.59
C9orf16-201ENST00000372994 VPS37DQ86XT2 251 aa18.75■□□□□ 0.59
C9orf16-201ENST00000372994 APOBEC3FQ8IUX4 373 aaKnown RBP18.75■□□□□ 0.59
C9orf16-201ENST00000372994 SPDYE2BA6NHP3 402 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 GNAI3P08754 354 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 IFIT1P09914 478 aaKnown RBP18.74■□□□□ 0.59
C9orf16-201ENST00000372994 SPDYE6P0CI01 402 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 HSPA8P11142 646 aaKnown RBP18.74■□□□□ 0.59
C9orf16-201ENST00000372994 ZNF157P51786 506 aaPredicted RBP18.74■□□□□ 0.59
C9orf16-201ENST00000372994 LBX1P52954 281 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 CFAP100Q494V2 611 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 TNS4Q8IZW8 715 aa18.74■□□□□ 0.59
C9orf16-201ENST00000372994 PRMT6Q96LA8 375 aaPredicted RBP18.74■□□□□ 0.59
C9orf16-201ENST00000372994 PAPPA2Q9BXP8 1791 aa18.73■□□□□ 0.59
C9orf16-201ENST00000372994 CA12O43570 354 aa18.73■□□□□ 0.59
C9orf16-201ENST00000372994 BCAMP50895 628 aa18.73■□□□□ 0.59
C9orf16-201ENST00000372994 FRAT1Q92837 279 aaPredicted RBP18.73■□□□□ 0.59
C9orf16-201ENST00000372994 ZIC5Q96T25 663 aa18.73■□□□□ 0.59
C9orf16-201ENST00000372994 PCDHAC2Q9Y5I4 1007 aa18.73■□□□□ 0.59
C9orf16-201ENST00000372994 ECM29Q5VYK3 1845 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 MYO1BO43795 1136 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 TBC1D22AQ8WUA7 517 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 LPIN2Q92539 896 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 COPRSQ9NQ92 184 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 SERPINA10Q9UK55 444 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 IQSEC3Q9UPP2 1182 aaPredicted RBP18.72■□□□□ 0.59
C9orf16-201ENST00000372994 ZBED9Q6R2W3 1325 aa18.72■□□□□ 0.59
C9orf16-201ENST00000372994 SLC10A3P09131 477 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 SLC5A1P13866 664 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 NF2P35240 595 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 MTX1Q13505 466 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 MOB2Q70IA6 237 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 SIL1Q9H173 461 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 DEFB129Q9H1M3 183 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 CEP126Q9P2H0 1117 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 TTF2Q9UNY4 1162 aaKnown RBP18.71■□□□□ 0.59
C9orf16-201ENST00000372994 TNNQ9UQP3 1299 aa18.71■□□□□ 0.59
C9orf16-201ENST00000372994 COL1A1P02452 1464 aaPredicted RBP18.71■□□□□ 0.59
C9orf16-201ENST00000372994 FRAT2O75474 233 aaPredicted RBP18.7■□□□□ 0.58
C9orf16-201ENST00000372994 IL15P40933 162 aaPredicted RBP18.7■□□□□ 0.58
C9orf16-201ENST00000372994 RBM5P52756 815 aaKnown RBP eCLIP18.7■□□□□ 0.58
C9orf16-201ENST00000372994 ZKSCAN2Q63HK3 967 aa18.7■□□□□ 0.58
C9orf16-201ENST00000372994 CLUAP1Q96AJ1 413 aa18.7■□□□□ 0.58
C9orf16-201ENST00000372994 PPP2R3BQ9Y5P8 575 aa18.7■□□□□ 0.58
C9orf16-201ENST00000372994 ARAP2Q8WZ64 1704 aa18.69■□□□□ 0.58
C9orf16-201ENST00000372994 UBE2Q2LH0YL09 131 aa18.69■□□□□ 0.58
C9orf16-201ENST00000372994 HDLBPQ00341 1268 aaKnown RBP18.69■□□□□ 0.58
C9orf16-201ENST00000372994 KIF23Q02241 960 aaPredicted RBP18.69■□□□□ 0.58
C9orf16-201ENST00000372994 CHAF1AQ13111 956 aaPredicted RBP18.69■□□□□ 0.58
C9orf16-201ENST00000372994 GRIK5Q16478 980 aa18.69■□□□□ 0.58
C9orf16-201ENST00000372994 PA2G4Q9UQ80 394 aaKnown RBP18.69■□□□□ 0.58
C9orf16-201ENST00000372994 AOX1Q06278 1338 aa18.69■□□□□ 0.58
C9orf16-201ENST00000372994 CLRN2A0PK11 232 aa18.68■□□□□ 0.58
C9orf16-201ENST00000372994 SRGAP3O43295 1099 aa18.68■□□□□ 0.58
C9orf16-201ENST00000372994 ATP2B3Q16720 1220 aa18.68■□□□□ 0.58
C9orf16-201ENST00000372994 MRIQ9BWK5 157 aa18.68■□□□□ 0.58
C9orf16-201ENST00000372994 SUGT1Q9Y2Z0 365 aa18.68■□□□□ 0.58
C9orf16-201ENST00000372994 GNAI2P04899 355 aa18.67■□□□□ 0.58
C9orf16-201ENST00000372994 CRKP46108 304 aa18.67■□□□□ 0.58
C9orf16-201ENST00000372994 TTLL12Q14166 644 aaPredicted RBP18.67■□□□□ 0.58
C9orf16-201ENST00000372994 RASAL3Q86YV0 1011 aa18.67■□□□□ 0.58
C9orf16-201ENST00000372994 REM2Q8IYK8 340 aaPredicted RBP18.67■□□□□ 0.58
C9orf16-201ENST00000372994 DZIP1LQ8IYY4 767 aaKnown RBP18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms