RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 TTLL12Q14166 644 aaPredicted RBP20.28■□□□□ 0.84
CKS1B-202ENST00000368436 DLGAP5Q15398 846 aa20.28■□□□□ 0.84
CKS1B-202ENST00000368436 TAF7LQ5H9L4 462 aa20.28■□□□□ 0.84
CKS1B-202ENST00000368436 SLC4A10Q6U841 1118 aa20.28■□□□□ 0.84
CKS1B-202ENST00000368436 KAZALD1Q96I82 304 aa20.28■□□□□ 0.84
CKS1B-202ENST00000368436 CNNM1Q9NRU3 951 aa20.28■□□□□ 0.84
CKS1B-202ENST00000368436 TM4SF4P48230 202 aa20.27■□□□□ 0.84
CKS1B-202ENST00000368436 UTYO14607 1347 aa20.27■□□□□ 0.83
CKS1B-202ENST00000368436 PLIN1O60240 522 aa20.26■□□□□ 0.83
CKS1B-202ENST00000368436 LDLRAD1Q5T700 205 aa20.26■□□□□ 0.83
CKS1B-202ENST00000368436 ARMC9Q7Z3E5 817 aa20.26■□□□□ 0.83
CKS1B-202ENST00000368436 DEFB129Q9H1M3 183 aa20.26■□□□□ 0.83
CKS1B-202ENST00000368436 NBPF7P0C2Y1 421 aaPredicted RBP20.25■□□□□ 0.83
CKS1B-202ENST00000368436 MLLT1Q03111 559 aaPredicted RBP20.25■□□□□ 0.83
CKS1B-202ENST00000368436 PTPN12Q05209 780 aaKnown RBP20.25■□□□□ 0.83
CKS1B-202ENST00000368436 SUCLG2Q96I99 432 aa20.25■□□□□ 0.83
CKS1B-202ENST00000368436 PCDHAC2Q9Y5I4 1007 aa20.25■□□□□ 0.83
CKS1B-202ENST00000368436 FAM205AQ6ZU69 1335 aa20.25■□□□□ 0.83
CKS1B-202ENST00000368436 UBE4AQ14139 1066 aa20.24■□□□□ 0.83
CKS1B-202ENST00000368436 CFAP100Q494V2 611 aa20.24■□□□□ 0.83
CKS1B-202ENST00000368436 MRPL50Q8N5N7 158 aaKnown RBP20.24■□□□□ 0.83
CKS1B-202ENST00000368436 PRMT6Q96LA8 375 aaPredicted RBP20.24■□□□□ 0.83
CKS1B-202ENST00000368436 PPP2R3BQ9Y5P8 575 aa20.24■□□□□ 0.83
CKS1B-202ENST00000368436 LAMB1P07942 1786 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 SPDYE2BA6NHP3 402 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 F8W031 263 aaPredicted RBP20.23■□□□□ 0.83
CKS1B-202ENST00000368436 SPDYE6P0CI01 402 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 PRKG1Q13976 671 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 MAP3K11Q16584 847 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 RABL6Q3YEC7 729 aaPredicted RBP20.23■□□□□ 0.83
CKS1B-202ENST00000368436 TDRD7Q8NHU6 1098 aaKnown RBP20.23■□□□□ 0.83
CKS1B-202ENST00000368436 PUS3Q9BZE2 481 aaKnown RBP20.23■□□□□ 0.83
CKS1B-202ENST00000368436 RIPOR2Q9Y4F9 1068 aa20.23■□□□□ 0.83
CKS1B-202ENST00000368436 ARAP2Q8WZ64 1704 aa20.22■□□□□ 0.83
CKS1B-202ENST00000368436 CTU1Q7Z7A3 348 aaKnown RBP20.22■□□□□ 0.83
CKS1B-202ENST00000368436 ANGEL1Q9UNK9 670 aaKnown RBP20.22■□□□□ 0.83
CKS1B-202ENST00000368436 JAG2Q9Y219 1238 aa20.22■□□□□ 0.83
CKS1B-202ENST00000368436 SSC5DA1L4H1 1573 aa20.21■□□□□ 0.83
CKS1B-202ENST00000368436 MYO1BO43795 1136 aa20.21■□□□□ 0.83
CKS1B-202ENST00000368436 TBC1D8O95759 1140 aa20.21■□□□□ 0.83
CKS1B-202ENST00000368436 HIBADHP31937 336 aaKnown RBP20.21■□□□□ 0.83
CKS1B-202ENST00000368436 NOM1Q5C9Z4 860 aaKnown RBP20.21■□□□□ 0.83
CKS1B-202ENST00000368436 FAM84BQ96KN1 310 aaPredicted RBP20.21■□□□□ 0.83
CKS1B-202ENST00000368436 PTPRCP08575 1304 aa20.21■□□□□ 0.83
CKS1B-202ENST00000368436 MROH5Q6ZUA9 1318 aa20.21■□□□□ 0.83
CKS1B-202ENST00000368436 GYG1P46976 350 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 SREBF2Q12772 1141 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 SPRYD7Q5W111 196 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 CFHR5Q9BXR6 569 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 BICC1Q9H694 974 aaKnown RBP20.2■□□□□ 0.82
CKS1B-202ENST00000368436 FZD1Q9UP38 647 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 AOX1Q06278 1338 aa20.2■□□□□ 0.82
CKS1B-202ENST00000368436 CLRN2A0PK11 232 aa20.19■□□□□ 0.82
CKS1B-202ENST00000368436 UNCXA6NJT0 531 aa20.19■□□□□ 0.82
CKS1B-202ENST00000368436 E9PSI1 815 aa20.19■□□□□ 0.82
CKS1B-202ENST00000368436 MKRN3Q13064 507 aaKnown RBP20.19■□□□□ 0.82
CKS1B-202ENST00000368436 ANKRD44Q8N8A2 993 aa20.19■□□□□ 0.82
CKS1B-202ENST00000368436 ZNF296Q8WUU4 475 aaPredicted RBP20.19■□□□□ 0.82
CKS1B-202ENST00000368436 PPP1R12BO60237 982 aaPredicted RBP20.18■□□□□ 0.82
CKS1B-202ENST00000368436 SUPT20HL1Q3ZLR7 823 aa20.18■□□□□ 0.82
CKS1B-202ENST00000368436 MFSD14BQ5SR56 506 aa20.18■□□□□ 0.82
CKS1B-202ENST00000368436 SERPINA10Q9UK55 444 aa20.18■□□□□ 0.82
CKS1B-202ENST00000368436 GPR25O00155 361 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 RBM5P52756 815 aaKnown RBP eCLIP20.17■□□□□ 0.82
CKS1B-202ENST00000368436 SLFN5Q08AF3 891 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 LRRC24Q50LG9 513 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 NBPF12Q5TAG4 269 aaPredicted RBP20.17■□□□□ 0.82
CKS1B-202ENST00000368436 FBXO33Q7Z6M2 555 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 POTEDQ86YR6 584 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 SSH1Q8WYL5 1049 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 SLC10A4Q96EP9 437 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 VEZTQ9HBM0 779 aa20.17■□□□□ 0.82
CKS1B-202ENST00000368436 TTF2Q9UNY4 1162 aaKnown RBP20.17■□□□□ 0.82
CKS1B-202ENST00000368436 ZBTB48P10074 688 aaPredicted RBP20.16■□□□□ 0.82
CKS1B-202ENST00000368436 INHBEP58166 350 aa20.16■□□□□ 0.82
CKS1B-202ENST00000368436 RASA3Q14644 834 aa20.16■□□□□ 0.82
CKS1B-202ENST00000368436 PKN2Q16513 984 aaKnown RBP20.16■□□□□ 0.82
CKS1B-202ENST00000368436 SPDYE2Q495Y8 402 aa20.16■□□□□ 0.82
CKS1B-202ENST00000368436 VGLL2Q8N8G2 317 aa20.16■□□□□ 0.82
CKS1B-202ENST00000368436 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
CKS1B-202ENST00000368436 MANSC4A6NHS7 340 aaPredicted RBP20.15■□□□□ 0.82
CKS1B-202ENST00000368436 USP2O75604 605 aaPredicted RBP20.15■□□□□ 0.82
CKS1B-202ENST00000368436 CLMNQ96JQ2 1002 aa20.15■□□□□ 0.82
CKS1B-202ENST00000368436 ZNF70Q9UC06 446 aaPredicted RBP20.15■□□□□ 0.82
CKS1B-202ENST00000368436 PDE8BO95263 885 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 ALDH1A1P00352 501 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 METTL24Q5JXM2 366 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 WNK4Q96J92 1243 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 R3HDMLQ9H3Y0 253 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 TDRD3Q9H7E2 651 aaKnown RBP20.14■□□□□ 0.81
CKS1B-202ENST00000368436 OTOFQ9HC10 1997 aa20.14■□□□□ 0.81
CKS1B-202ENST00000368436 TNFAIP1Q13829 316 aa20.13■□□□□ 0.81
CKS1B-202ENST00000368436 ALDH1L2Q3SY69 923 aa20.13■□□□□ 0.81
CKS1B-202ENST00000368436 DZIP1LQ8IYY4 767 aaKnown RBP20.13■□□□□ 0.81
CKS1B-202ENST00000368436 HPS5Q9UPZ3 1129 aa20.13■□□□□ 0.81
CKS1B-202ENST00000368436 CRKP46108 304 aa20.12■□□□□ 0.81
CKS1B-202ENST00000368436 IREB2P48200 963 aaKnown RBP20.12■□□□□ 0.81
CKS1B-202ENST00000368436 HDLBPQ00341 1268 aaKnown RBP20.12■□□□□ 0.81
CKS1B-202ENST00000368436 GRIK5Q16478 980 aa20.12■□□□□ 0.81
CKS1B-202ENST00000368436 CAVIN4Q5BKX8 364 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms