RNA–Protein interactions for RNA: ENST00000368298.2

LMNA-204, Transcript of lamin A/C, humanhuman

TSL 1 (best)

Gene LMNA, Length 1,475 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-204ENST00000368298 NEUROD6Q96NK8 337 aa23■■□□□ 1.27
LMNA-204ENST00000368298 PPP4R2Q9NY27 417 aa23■■□□□ 1.27
LMNA-204ENST00000368298 CNOT7Q9UIV1 285 aaKnown RBP23■■□□□ 1.27
LMNA-204ENST00000368298 SEMA3EO15041 775 aa22.99■■□□□ 1.27
LMNA-204ENST00000368298 EPHX2P34913 555 aa22.99■■□□□ 1.27
LMNA-204ENST00000368298 HDAC1Q13547 482 aaPredicted RBP22.99■■□□□ 1.27
LMNA-204ENST00000368298 GNL3LQ9NVN8 582 aaKnown RBP22.99■■□□□ 1.27
LMNA-204ENST00000368298 PHKA1P46020 1223 aa22.98■■□□□ 1.27
LMNA-204ENST00000368298 PNMA8AQ86V59 439 aaPredicted RBP22.98■■□□□ 1.27
LMNA-204ENST00000368298 EAF2Q96CJ1 260 aaPredicted RBP22.98■■□□□ 1.27
LMNA-204ENST00000368298 ZNF280AP59817 542 aaPredicted RBP22.98■■□□□ 1.27
LMNA-204ENST00000368298 MICALL2Q8IY33 904 aa22.98■■□□□ 1.27
LMNA-204ENST00000368298 ADARB2Q9NS39 739 aaKnown RBP22.98■■□□□ 1.27
LMNA-204ENST00000368298 USP50Q70EL3 339 aaPredicted RBP22.97■■□□□ 1.27
LMNA-204ENST00000368298 CERS5Q8N5B7 392 aa22.97■■□□□ 1.27
LMNA-204ENST00000368298 MXD3Q9BW11 206 aa22.97■■□□□ 1.27
LMNA-204ENST00000368298 IQSEC3Q9UPP2 1182 aaPredicted RBP22.97■■□□□ 1.27
LMNA-204ENST00000368298 PDS5AQ29RF7 1337 aaKnown RBP22.97■■□□□ 1.27
LMNA-204ENST00000368298 MYH13Q9UKX3 1938 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 ADAMTSL1Q8N6G6 1762 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 H7C1D1 291 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 FRAT2O75474 233 aaPredicted RBP22.96■■□□□ 1.27
LMNA-204ENST00000368298 TOMM70O94826 608 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 USP17L8P0C7I0 530 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 CLASRPQ8N2M8 674 aaKnown RBP22.96■■□□□ 1.27
LMNA-204ENST00000368298 TBC1D22AQ8WUA7 517 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 FBXW7Q969H0 707 aa22.96■■□□□ 1.27
LMNA-204ENST00000368298 ZNF512BQ96KM6 892 aaPredicted RBP22.96■■□□□ 1.27
LMNA-204ENST00000368298 ARID4AP29374 1257 aaPredicted RBP22.95■■□□□ 1.26
LMNA-204ENST00000368298 DBNDD2Q9BQY9 259 aa22.95■■□□□ 1.26
LMNA-204ENST00000368298 LRRCC1Q9C099 1032 aa22.95■■□□□ 1.26
LMNA-204ENST00000368298 IL1RAPL2Q9NP60 686 aa22.95■■□□□ 1.26
LMNA-204ENST00000368298 DBNLQ9UJU6 430 aaKnown RBP22.95■■□□□ 1.26
LMNA-204ENST00000368298 DENND2AQ9ULE3 1009 aa22.95■■□□□ 1.26
LMNA-204ENST00000368298 SHTN1A0MZ66 631 aa22.94■■□□□ 1.26
LMNA-204ENST00000368298 MFSD14BQ5SR56 506 aa22.94■■□□□ 1.26
LMNA-204ENST00000368298 GORABQ5T7V8 394 aa22.94■■□□□ 1.26
LMNA-204ENST00000368298 C16orf71Q8IYS4 520 aaPredicted RBP22.94■■□□□ 1.26
LMNA-204ENST00000368298 WDR66Q8TBY9 1149 aa22.94■■□□□ 1.26
LMNA-204ENST00000368298 COL1A1P02452 1464 aaPredicted RBP22.94■■□□□ 1.26
LMNA-204ENST00000368298 RASGRF1Q13972 1273 aa22.93■■□□□ 1.26
LMNA-204ENST00000368298 AACSQ86V21 672 aa22.93■■□□□ 1.26
LMNA-204ENST00000368298 RBM46Q8TBY0 533 aaKnown RBP22.93■■□□□ 1.26
LMNA-204ENST00000368298 SUGT1Q9Y2Z0 365 aa22.93■■□□□ 1.26
LMNA-204ENST00000368298 SALL1Q9NSC2 1324 aa22.93■■□□□ 1.26
LMNA-204ENST00000368298 APBB1O00213 710 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 UQCRFS1P1P0C7P4 283 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 CCDC158Q5M9N0 1113 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 OGFOD1Q8N543 542 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 CCDC8Q9H0W5 538 aaPredicted RBP22.92■■□□□ 1.26
LMNA-204ENST00000368298 TLR7Q9NYK1 1049 aaKnown RBP22.92■■□□□ 1.26
LMNA-204ENST00000368298 JAG2Q9Y219 1238 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 CHAF1AQ13111 956 aaPredicted RBP22.92■■□□□ 1.26
LMNA-204ENST00000368298 LDHDQ86WU2 507 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 KIAA0825Q8IV33 1275 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 GCC1Q96CN9 775 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 RWDD1Q9H446 243 aaPredicted RBP22.92■■□□□ 1.26
LMNA-204ENST00000368298 PGAP2Q9UHJ9 254 aa22.92■■□□□ 1.26
LMNA-204ENST00000368298 HIRAP54198 1017 aaPredicted RBP22.91■■□□□ 1.26
LMNA-204ENST00000368298 SAMD7Q7Z3H4 446 aa22.91■■□□□ 1.26
LMNA-204ENST00000368298 ZC3H15Q8WU90 426 aaKnown RBP22.91■■□□□ 1.26
LMNA-204ENST00000368298 HDAC9Q9UKV0 1011 aa22.91■■□□□ 1.26
LMNA-204ENST00000368298 POTEIP0CG38 1075 aa22.9■■□□□ 1.26
LMNA-204ENST00000368298 POTEJP0CG39 1038 aa22.9■■□□□ 1.26
LMNA-204ENST00000368298 TRPM4Q8TD43 1214 aa22.9■■□□□ 1.26
LMNA-204ENST00000368298 MYOZ2Q9NPC6 264 aa22.9■■□□□ 1.26
LMNA-204ENST00000368298 HMG20BQ9P0W2 317 aa22.9■■□□□ 1.26
LMNA-204ENST00000368298 AKAP11Q9UKA4 1901 aa22.89■■□□□ 1.25
LMNA-204ENST00000368298 EGFRP00533 1210 aa22.89■■□□□ 1.25
LMNA-204ENST00000368298 EAPPQ56P03 285 aaPredicted RBP22.89■■□□□ 1.25
LMNA-204ENST00000368298 SPATA5Q8NB90 893 aa22.89■■□□□ 1.25
LMNA-204ENST00000368298 MRIQ9BWK5 157 aa22.89■■□□□ 1.25
LMNA-204ENST00000368298 IFIT2P09913 472 aaKnown RBP22.88■■□□□ 1.25
LMNA-204ENST00000368298 MCAMP43121 646 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 FSTL1Q12841 308 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 KIF4BQ2VIQ3 1234 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 TBC1D10BQ4KMP7 808 aaPredicted RBP22.88■■□□□ 1.25
LMNA-204ENST00000368298 TTC39AQ5SRH9 613 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 SMC5Q8IY18 1101 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 MTMR14Q8NCE2 650 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 SMC1BQ8NDV3 1235 aa22.88■■□□□ 1.25
LMNA-204ENST00000368298 ZBED3Q96IU2 234 aaPredicted RBP22.88■■□□□ 1.25
LMNA-204ENST00000368298 IGHDP01880 384 aa22.87■■□□□ 1.25
LMNA-204ENST00000368298 HDLBPQ00341 1268 aaKnown RBP22.87■■□□□ 1.25
LMNA-204ENST00000368298 SCARF1Q14162 830 aa22.87■■□□□ 1.25
LMNA-204ENST00000368298 CHADLQ6NUI6 762 aa22.87■■□□□ 1.25
LMNA-204ENST00000368298 ZGPATQ8N5A5 531 aaKnown RBP22.87■■□□□ 1.25
LMNA-204ENST00000368298 SMARCA5O60264 1052 aaPredicted RBP22.86■■□□□ 1.25
LMNA-204ENST00000368298 GRIK5Q16478 980 aa22.86■■□□□ 1.25
LMNA-204ENST00000368298 SERPINA10Q9UK55 444 aa22.86■■□□□ 1.25
LMNA-204ENST00000368298 TTF2Q9UNY4 1162 aaKnown RBP22.86■■□□□ 1.25
LMNA-204ENST00000368298 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.85■■□□□ 1.25
LMNA-204ENST00000368298 MAST3O60307 1309 aa22.85■■□□□ 1.25
LMNA-204ENST00000368298 F8W031 263 aaPredicted RBP22.85■■□□□ 1.25
LMNA-204ENST00000368298 RBM26Q5T8P6 1007 aaKnown RBP22.85■■□□□ 1.25
LMNA-204ENST00000368298 PI16Q6UXB8 463 aa22.85■■□□□ 1.25
LMNA-204ENST00000368298 WNT10BO00744 389 aa22.84■■□□□ 1.25
LMNA-204ENST00000368298 IGSF3O75054 1194 aa22.84■■□□□ 1.25
LMNA-204ENST00000368298 CLEC11AQ9Y240 323 aa22.84■■□□□ 1.25
LMNA-204ENST00000368298 LDHBP07195 334 aaKnown RBP22.83■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms