RNA–Protein interactions for RNA: ENST00000357162.6

VPS13B-202, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VPS13B, Length 14,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-202ENST00000357162 FYB2Q5VWT5 728 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 KRI1Q8N9T8 703 aaKnown RBP7.4□□□□□ -1.22
VPS13B-202ENST00000357162 RETREG2Q8NC44 543 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 SPATS2LQ9NUQ6 558 aaKnown RBP7.4□□□□□ -1.22
VPS13B-202ENST00000357162 TRIM75PA6NK02 468 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 GJB2P29033 226 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 MAN1A1P33908 653 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 ZBTB16Q05516 673 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 PPP1R2P3Q6NXS1 205 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 ITGB1BP2Q9UKP3 347 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 SPTLC2O15270 562 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA8QA0A0J9YX86 632 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA8OA6NCC3 632 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 GOLGA8NF8WBI6 632 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 TSR2Q969E8 191 aaKnown RBP7.4□□□□□ -1.22
VPS13B-202ENST00000357162 ZNF652Q9Y2D9 606 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 IGHMBP2P38935 993 aaKnown RBP7.4□□□□□ -1.22
VPS13B-202ENST00000357162 LGSNQ5TDP6 509 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 ESYT1Q9BSJ8 1104 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 ASXL2Q76L83 1435 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 MYL1P05976 194 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 PLCD1P51178 756 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 GKAP1Q5VSY0 366 aaPredicted RBP7.4□□□□□ -1.22
VPS13B-202ENST00000357162 KDM2BQ8NHM5 1336 aa7.4□□□□□ -1.22
VPS13B-202ENST00000357162 CKAP2LQ8IYA6 745 aa7.4□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC151A5D8V7 595 aa7.4□□□□□ -1.23
VPS13B-202ENST00000357162 NLRP6P59044 892 aa7.4□□□□□ -1.23
VPS13B-202ENST00000357162 TRIM58Q8NG06 486 aa7.4□□□□□ -1.23
VPS13B-202ENST00000357162 IARSP41252 1262 aaKnown RBP7.4□□□□□ -1.23
VPS13B-202ENST00000357162 NUP133Q8WUM0 1156 aa7.4□□□□□ -1.23
VPS13B-202ENST00000357162 BAG1Q99933 345 aaPredicted RBP7.4□□□□□ -1.23
VPS13B-202ENST00000357162 ORC3Q9UBD5 711 aaPredicted RBP7.4□□□□□ -1.23
VPS13B-202ENST00000357162 FAM177A1Q8N128 213 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 DTNBP1Q96EV8 351 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 RTTNQ86VV8 2226 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 GNA11P29992 359 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 KCNJ6P48051 423 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 PLCG2P16885 1265 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 TATP17735 454 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 CEBPZQ03701 1054 aaKnown RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 PLCD3Q8N3E9 789 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 GAS8O95995 478 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 CASQ2O14958 399 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 STARD3NLO95772 234 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 CCDC186Q7Z3E2 898 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 PPP1R14CQ8TAE6 165 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 DRC3Q9H069 523 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 AP1ARQ63HQ0 302 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 USP48Q86UV5 1035 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 CABS1Q96KC9 395 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 FLIIQ13045 1269 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 ZSCAN26Q16670 478 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 ANO6Q4KMQ2 910 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 NUTM2BA6NNL0 878 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 NUTM2EB1AL46 878 aaPredicted RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 HOMER2Q9NSB8 354 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 PNMA2Q9UL42 364 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 PRIM1P49642 420 aaKnown RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 LMNB2Q03252 620 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 TDRD12Q587J7 1177 aaKnown RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 DHX32Q7L7V1 743 aaKnown RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 NAA25Q14CX7 972 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 CFAP221Q4G0U5 840 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 SMC1BQ8NDV3 1235 aa7.39□□□□□ -1.23
VPS13B-202ENST00000357162 UTP11Q9Y3A2 253 aaKnown RBP7.39□□□□□ -1.23
VPS13B-202ENST00000357162 RAPGEF6Q8TEU7 1601 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 GMNNO75496 209 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 RLBP1P12271 317 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 STMN1P16949 149 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF131P52739 623 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 FERMT2Q96AC1 680 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 TRIM47Q96LD4 638 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MSH6P52701 1360 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ABCA5Q8WWZ7 1642 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 TBCAO75347 108 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 SNX16P57768 344 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MFSD6Q6ZSS7 791 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ZBTB40Q9NUA8 1239 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 PSDA5PKW4 1024 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 HIP1RO75146 1068 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 HMOX1P09601 288 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 FNBP4Q8N3X1 1017 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 LZTS2Q9BRK4 669 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MOV10L1Q9BXT6 1211 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 BAG3O95817 575 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ZNF75DP51815 510 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 PDE1AP54750 535 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MRVI1Q9Y6F6 885 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 PPFIA2O75334 1257 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MPHOSPH6Q99547 160 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 GOLGA8KD6RF30 607 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 SLC5A1P13866 664 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ZKSCAN8Q15776 578 aaPredicted RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 MAIP1Q8WWC4 291 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 ESR2Q92731 530 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 LDHCP07864 332 aa7.38□□□□□ -1.23
VPS13B-202ENST00000357162 CLNS1AP54105 237 aaKnown RBP7.38□□□□□ -1.23
VPS13B-202ENST00000357162 GPATCH11Q8N954 259 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms