RNA–Protein interactions for RNA: ENST00000345795.6

CASC4-202, Transcript of cancer susceptibility 4, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CASC4, Length 3,764 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-202ENST00000345795 CCDC87Q9NVE4 849 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 NR1I2O75469 434 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 MCAMP43121 646 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 MFSD6Q6ZSS7 791 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 TTLL11Q8NHH1 800 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 INTS4Q96HW7 963 aaKnown RBP15.54■□□□□ 0.08
CASC4-202ENST00000345795 AATFQ9NY61 560 aaKnown RBP eCLIP15.54■□□□□ 0.08
CASC4-202ENST00000345795 ITSN1Q15811 1721 aa15.54■□□□□ 0.08
CASC4-202ENST00000345795 UBE2Q2LH0YL09 131 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 USP5P45974 858 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 ATG9AQ7Z3C6 839 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 SAP30BPQ9UHR5 308 aaKnown RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 EIF6P56537 245 aaKnown RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 MSL1Q68DK7 614 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 GNL3LQ9NVN8 582 aaKnown RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 MAP3K15Q6ZN16 1313 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 KDM6AO15550 1401 aaPredicted RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 H7C1W4 665 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 MARCH6O60337 910 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 IARSP41252 1262 aaKnown RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 AK7Q96M32 723 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 PIH1D3Q9NQM4 214 aaKnown RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 HMG20BQ9P0W2 317 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 CCNL1Q9UK58 526 aaPredicted RBP15.53■□□□□ 0.08
CASC4-202ENST00000345795 CFAP45Q9UL16 551 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 ZNF652Q9Y2D9 606 aa15.53■□□□□ 0.08
CASC4-202ENST00000345795 PICALMQ13492 652 aa15.52■□□□□ 0.08
CASC4-202ENST00000345795 FAM47AQ5JRC9 791 aa15.52■□□□□ 0.08
CASC4-202ENST00000345795 STAMQ92783 540 aa15.52■□□□□ 0.08
CASC4-202ENST00000345795 NOL10Q9BSC4 688 aaKnown RBP15.52■□□□□ 0.08
CASC4-202ENST00000345795 SCAND2PQ9GZW5 306 aaPredicted RBP15.52■□□□□ 0.08
CASC4-202ENST00000345795 PDE8AO60658 829 aa15.52■□□□□ 0.07
CASC4-202ENST00000345795 GPIHBP1Q8IV16 184 aa15.52■□□□□ 0.07
CASC4-202ENST00000345795 C16orf45Q96MC5 204 aaPredicted RBP15.52■□□□□ 0.07
CASC4-202ENST00000345795 PLIN2Q99541 437 aa15.52■□□□□ 0.07
CASC4-202ENST00000345795 TOB2Q14106 344 aaPredicted RBP15.52■□□□□ 0.07
CASC4-202ENST00000345795 HSP90AA2PQ14568 343 aaPredicted RBP15.52■□□□□ 0.07
CASC4-202ENST00000345795 USP28Q96RU2 1077 aa15.52■□□□□ 0.07
CASC4-202ENST00000345795 NRXN3Q9Y4C0 1643 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 KDM4FA0A1W2PPD8 638 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 ERFEQ4G0M1 354 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 ZSCAN25Q6NSZ9 544 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.51■□□□□ 0.076e-6■■□□□ 13.4
CASC4-202ENST00000345795 CCDC39Q9UFE4 941 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 ZBTB43O43298 467 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 TOM1O60784 492 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 TPD52L1Q16890 204 aaPredicted RBP15.51■□□□□ 0.07
CASC4-202ENST00000345795 ZSCAN29Q8IWY8 852 aaPredicted RBP15.51■□□□□ 0.07
CASC4-202ENST00000345795 TRIM22Q8IYM9 498 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 ZNF396Q96N95 335 aaPredicted RBP15.51■□□□□ 0.07
CASC4-202ENST00000345795 UBR1Q8IWV7 1749 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 DYNLL1P63167 89 aaKnown RBP15.51■□□□□ 0.07
CASC4-202ENST00000345795 NLRP3Q96P20 1036 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 TNS3Q68CZ2 1445 aa15.51■□□□□ 0.07
CASC4-202ENST00000345795 PDE6AP16499 860 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 IKQ13123 557 aaPredicted RBP15.5■□□□□ 0.07
CASC4-202ENST00000345795 SPATA5Q8NB90 893 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 TMX4Q9H1E5 349 aaPredicted RBP15.5■□□□□ 0.07
CASC4-202ENST00000345795 MKNK2Q9HBH9 465 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 GOLGA6L6A8MZA4 724 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 MTX1Q13505 466 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 LEO1Q8WVC0 666 aaPredicted RBP15.5■□□□□ 0.07
CASC4-202ENST00000345795 APPBP2Q92624 585 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 PEAK1Q9H792 1746 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 SALL3Q9BXA9 1300 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 TYRO3Q06418 890 aa15.5■□□□□ 0.07
CASC4-202ENST00000345795 NAA16Q6N069 864 aaPredicted RBP15.5■□□□□ 0.07
CASC4-202ENST00000345795 CDC5LQ99459 802 aaKnown RBP15.5■□□□□ 0.07
CASC4-202ENST00000345795 AOX1Q06278 1338 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 BAZ2BQ9UIF8 2168 aaKnown RBP15.49■□□□□ 0.07
CASC4-202ENST00000345795 FSD2A1L4K1 749 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 TSPY2A6NKD2 308 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 SMIM22K7EJ46 135 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 COBLO75128 1261 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 PDE8BO95263 885 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 CUL4AQ13619 759 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 ZNF622Q969S3 477 aaKnown RBP eCLIP15.49■□□□□ 0.078e-8■□□□□ 10.6
CASC4-202ENST00000345795 CYP2E1P05181 493 aaPredicted RBP15.49■□□□□ 0.07
CASC4-202ENST00000345795 CHRNDQ07001 517 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 PDE4CQ08493 712 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 EEF2KMTQ96G04 330 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 SENP2Q9HC62 589 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 LMOD1P29536 600 aaPredicted RBP15.49■□□□□ 0.07
CASC4-202ENST00000345795 AFMP43652 599 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 RASGRF1Q13972 1273 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 GTF3C6Q969F1 213 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 TTC14Q96N46 770 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 USP21Q9UK80 565 aa15.49■□□□□ 0.07
CASC4-202ENST00000345795 FER1L4A9Z1Z3 1794 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 PCCAP05165 728 aaPredicted RBP15.48■□□□□ 0.07
CASC4-202ENST00000345795 PTGS1P23219 599 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 RFX5P48382 616 aaPredicted RBP15.48■□□□□ 0.07
CASC4-202ENST00000345795 PUM3Q15397 648 aaKnown RBP15.48■□□□□ 0.07
CASC4-202ENST00000345795 CCDC186Q7Z3E2 898 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 MCM9Q9NXL9 1143 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 ERCC3P19447 782 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 WTAPQ15007 396 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 MPHOSPH10O00566 681 aaKnown RBP15.48■□□□□ 0.07
CASC4-202ENST00000345795 SERPINC1P01008 464 aa15.48■□□□□ 0.07
CASC4-202ENST00000345795 CPLX3Q8WVH0 158 aa15.48■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms