RNA–Protein interactions for RNA: ENST00000345080.4

LIN28B-201, Transcript of lin-28 homolog B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIN28B, Length 5,505 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN28B-201ENST00000345080 MBD5Q9P267 1494 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 SMIM23A6NLE4 172 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 H0YIN7 160 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 ZSCAN25Q6NSZ9 544 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 ARHGAP27Q6ZUM4 889 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 RUFY3Q7L099 469 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 CCDC12Q8WUD4 166 aaPredicted RBP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 SSH1Q8WYL5 1049 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 SLC5A4Q9NY91 659 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 A2MP01023 1474 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 CFAP100Q494V2 611 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 CRACR2BQ8N4Y2 399 aaPredicted RBP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 STMN4Q9H169 189 aaPredicted RBP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 ACTR5Q9H9F9 607 aaPredicted RBP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 XAB2Q9HCS7 855 aaKnown RBP8.73□□□□□ -1.01
LIN28B-201ENST00000345080 SLAIN2Q9P270 581 aa8.73□□□□□ -1.01
LIN28B-201ENST00000345080 PLCH2O75038 1416 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 NOP2P46087 812 aaKnown RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 ATP11AP98196 1134 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TMC6Q7Z403 805 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TRIM4Q9C037 500 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 SPATA31A6Q5VVP1 1343 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 ELL2O00472 640 aaPredicted RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 STX6O43752 255 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TRIM27P14373 513 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 COG7P83436 770 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 PPFIA1Q13136 1202 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 STK38Q15208 465 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 CCDC92Q53HC0 331 aaPredicted RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 PPP4R3AQ6IN85 833 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TSR2Q969E8 191 aaKnown RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 SAAL1Q96ER3 474 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 SETDB2Q96T68 719 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 GGNBP2Q9H3C7 697 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 CALR3Q96L12 384 aaKnown RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 SOS1Q07889 1333 aaPredicted RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 CEP104O60308 925 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 PSMD7P51665 324 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 HLTFQ14527 1009 aaKnown RBP eCLIP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TTC22Q5TAA0 569 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 TESK2Q96S53 571 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 VCX3BQ9H321 246 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 VCX3AQ9NNX9 186 aa8.72□□□□□ -1.01
LIN28B-201ENST00000345080 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.72□□□□□ -1.01
LIN28B-201ENST00000345080 PLXNC1O60486 1568 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 CTAGE9A4FU28 777 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 PAFAH1B1P43034 410 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 MXRA7P84157 204 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 USP48Q86UV5 1035 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 ZNF219Q9P2Y4 722 aaPredicted RBP8.71□□□□□ -1.01
LIN28B-201ENST00000345080 GOLGA8KD6RF30 607 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 ZNF75DP51815 510 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 TYRO3Q06418 890 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 EAPPQ56P03 285 aaPredicted RBP8.71□□□□□ -1.01
LIN28B-201ENST00000345080 CCDC129Q6ZRS4 1044 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 TBC1D9Q6ZT07 1266 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 N4BP2L2Q92802 583 aaPredicted RBP8.71□□□□□ -1.01
LIN28B-201ENST00000345080 MAGEC2Q9UBF1 373 aaPredicted RBP8.71□□□□□ -1.01
LIN28B-201ENST00000345080 IKBKGQ9Y6K9 419 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 MAGI2Q86UL8 1455 aa8.71□□□□□ -1.01
LIN28B-201ENST00000345080 KDM5AP29375 1690 aaKnown RBP8.71□□□□□ -1.01
LIN28B-201ENST00000345080 FOXO3O43524 673 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 RWDD2BP57060 319 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 CLASP1Q7Z460 1538 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 SRLQ86TD4 932 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 PRPF38AQ8NAV1 312 aaKnown RBP8.71□□□□□ -1.02
LIN28B-201ENST00000345080 KLHDC4Q8TBB5 520 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 JAKMIP1Q96N16 626 aaKnown RBP8.71□□□□□ -1.02
LIN28B-201ENST00000345080 ANAPC4Q9UJX5 808 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 RIMS2Q9UQ26 1411 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 SMIM24O75264 130 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 PPFIA4O75335 1185 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 MAP7Q14244 749 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 SAFBQ15424 915 aaKnown RBP eCLIP8.71□□□□□ -1.02
LIN28B-201ENST00000345080 BRDTQ58F21 947 aaPredicted RBP8.71□□□□□ -1.02
LIN28B-201ENST00000345080 TEX11Q8IYF3 940 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 NUDT16Q96DE0 195 aaKnown RBP8.71□□□□□ -1.02
LIN28B-201ENST00000345080 RPGRIP1Q96KN7 1286 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 PBRM1Q86U86 1689 aa8.71□□□□□ -1.02
LIN28B-201ENST00000345080 CETN3O15182 167 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 IL2RBP14784 551 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 PSMD2Q13200 908 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 ANO6Q4KMQ2 910 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 CFAP58Q5T655 872 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 CCDC65Q8IXS2 484 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 KIAA1524Q8TCG1 905 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 SLC12A5Q9H2X9 1139 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 UBAP1Q9NZ09 502 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 NPHP4O75161 1426 aaPredicted RBP8.7□□□□□ -1.02
LIN28B-201ENST00000345080 NDUFAB1O14561 156 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 ZWINTO95229 277 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 SART3Q15020 963 aaKnown RBP8.7□□□□□ -1.02
LIN28B-201ENST00000345080 CDK5RAP3Q96JB5 506 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 CAPN7Q9Y6W3 813 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 LRRD1A4D1F6 860 aa8.7□□□□□ -1.02
LIN28B-201ENST00000345080 PSDA5PKW4 1024 aaPredicted RBP8.7□□□□□ -1.02
LIN28B-201ENST00000345080 NAA16Q6N069 864 aaPredicted RBP8.7□□□□□ -1.02
LIN28B-201ENST00000345080 FCHSD1Q86WN1 690 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms