RNA–Protein interactions for RNA: ENST00000344683.9

MCPH1-201, Transcript of microcephalin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MCPH1, Length 8,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCPH1-201ENST00000344683 MINDY4BA8MYZ0 360 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 GOLGA8KD6RF30 607 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 GOLGA8NF8WBI6 632 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 BRD2P25440 801 aaKnown RBP9.36□□□□□ -0.91
MCPH1-201ENST00000344683 KIFAP3Q92845 792 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 EFCC1Q9HA90 598 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 HAUS2Q9NVX0 235 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 BAIAP2L1Q9UHR4 511 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 ERBINQ96RT1 1412 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 CYB5RLQ6IPT4 315 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 TMTC2Q8N394 836 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 SPG7Q9UQ90 795 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 CAPN7Q9Y6W3 813 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 TMEM110-MUSTN1A8MSY1 372 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 SPECC1L-ADORA2AF8WAN1 911 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 SLFN5Q08AF3 891 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 PAK2Q13177 524 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 ARMC9Q7Z3E5 817 aa9.36□□□□□ -0.91
MCPH1-201ENST00000344683 LRPPRCP42704 1394 aaKnown RBP9.36□□□□□ -0.91
MCPH1-201ENST00000344683 BTBD11A6QL63 1104 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 RNF40O75150 1001 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 IDEP14735 1019 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TATP17735 454 aaPredicted RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TFIP11Q9UBB9 837 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 STK10O94804 968 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 OAS2P29728 719 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TRAF1Q13077 416 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 DIXDC1Q155Q3 683 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 CCDC92Q53HC0 331 aaPredicted RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 RASIP1Q5U651 963 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TBC1D9Q6ZT07 1266 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 MORC4Q8TE76 937 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 DACT3Q96B18 629 aaPredicted RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 CCDC68Q9H2F9 335 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 FGD6Q6ZV73 1430 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 KRT3P12035 628 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 CCT2P78371 535 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TMEM67Q5HYA8 995 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 CCDC122Q5T0U0 273 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 GDPD2Q9HCC8 539 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 NLRP2Q9NX02 1062 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TROVE2P10155 538 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 ZNF354CQ86Y25 554 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 EFCAB13Q8IY85 973 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 PPP4R1Q8TF05 950 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 USP6NLQ92738 828 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 GGNBP2Q9H3C7 697 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 EFCAB5A4FU69 1503 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 PDE4BQ07343 736 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 ANKRD20A3Q5VUR7 823 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 TMEM87AQ8NBN3 555 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 NCOA7Q8NI08 942 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 PRIM1P49642 420 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 ESRRGP62508 458 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 HHATQ5VTY9 493 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 SDCCAG3Q96C92 435 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 NRBF2Q96F24 287 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 CENPKQ9BS16 269 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 SCINQ9Y6U3 715 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 IFIT1P09914 478 aaKnown RBP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 BRD3Q15059 726 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 METTL24Q5JXM2 366 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 NEK1Q96PY6 1258 aa9.35□□□□□ -0.91
MCPH1-201ENST00000344683 DDX21Q9NR30 783 aaKnown RBP eCLIP9.35□□□□□ -0.91
MCPH1-201ENST00000344683 ATF3P18847 181 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 PEX19P40855 299 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 NUTM2AQ8IVF1 878 aaPredicted RBP9.34□□□□□ -0.91
MCPH1-201ENST00000344683 U2AF2P26368 475 aaKnown RBP eCLIP9.34□□□□□ -0.91
MCPH1-201ENST00000344683 TMCO4Q5TGY1 634 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 DUSP27Q5VZP5 1158 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 NUP58Q9BVL2 599 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 MYL6BP14649 208 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 RAB17Q9H0T7 212 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 MMRN2Q9H8L6 949 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 MED4Q9NPJ6 270 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 AGTPBP1Q9UPW5 1226 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 CNPY2Q9Y2B0 182 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 WDR97A6NE52 1622 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 SYCE1Q8N0S2 351 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 CRACR2BQ8N4Y2 399 aaPredicted RBP9.34□□□□□ -0.91
MCPH1-201ENST00000344683 IL1RAPL2Q9NP60 686 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 KLHL14Q9P2G3 628 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 EPS15L1Q9UBC2 864 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 RANBP6O60518 1105 aaKnown RBP9.34□□□□□ -0.91
MCPH1-201ENST00000344683 KLHDC4Q8TBB5 520 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 P3H4Q92791 437 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 JPH4Q96JJ6 628 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 STK38LQ9Y2H1 464 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 USP16Q9Y5T5 823 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 UAP1Q16222 522 aaPredicted RBP9.34□□□□□ -0.91
MCPH1-201ENST00000344683 MAP3K1Q13233 1512 aa9.34□□□□□ -0.91
MCPH1-201ENST00000344683 IFT140Q96RY7 1462 aa9.33□□□□□ -0.92
MCPH1-201ENST00000344683 PPP1R21Q6ZMI0 780 aa9.33□□□□□ -0.92
MCPH1-201ENST00000344683 LRRC43Q8N309 656 aa9.33□□□□□ -0.92
MCPH1-201ENST00000344683 CCDC82Q8N4S0 544 aa9.33□□□□□ -0.92
MCPH1-201ENST00000344683 ZNF692Q9BU19 519 aaPredicted RBP9.33□□□□□ -0.92
MCPH1-201ENST00000344683 CTTNBP2NLQ9P2B4 639 aa9.33□□□□□ -0.92
MCPH1-201ENST00000344683 LMNB2Q03252 620 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 69.3 ms