RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 LGR6Q9HBX8 967 aa15.54■□□□□ 0.08
ATXN3-201ENST00000340660 RIC1Q4ADV7 1423 aa15.53■□□□□ 0.08
ATXN3-201ENST00000340660 IGF2BP3O00425 579 aaKnown RBP eCLIP15.53■□□□□ 0.08
ATXN3-201ENST00000340660 HOXA10P31260 410 aaPredicted RBP15.53■□□□□ 0.08
ATXN3-201ENST00000340660 KIAA2012Q0VF49 1180 aa15.53■□□□□ 0.08
ATXN3-201ENST00000340660 UBR2Q8IWV8 1755 aa15.53■□□□□ 0.08
ATXN3-201ENST00000340660 KIF20BQ96Q89 1820 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 KIF7Q2M1P5 1343 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 PSMD14O00487 310 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 SP3Q02447 781 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 CRHR2Q13324 411 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 MTFR1Q15390 333 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 PADI6Q6TGC4 694 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 NUDT18Q6ZVK8 323 aa15.52■□□□□ 0.08
ATXN3-201ENST00000340660 MAFAQ8NHW3 353 aaPredicted RBP15.52■□□□□ 0.08
ATXN3-201ENST00000340660 ANGEL2Q5VTE6 544 aaKnown RBP15.51■□□□□ 0.07
ATXN3-201ENST00000340660 SPRYD7Q5W111 196 aa15.51■□□□□ 0.07
ATXN3-201ENST00000340660 CLEC4GQ6UXB4 293 aa15.51■□□□□ 0.07
ATXN3-201ENST00000340660 FAM161BQ96MY7 647 aa15.51■□□□□ 0.07
ATXN3-201ENST00000340660 A1BGP04217 495 aa15.5■□□□□ 0.07
ATXN3-201ENST00000340660 RPGRQ92834 1020 aaKnown RBP15.5■□□□□ 0.07
ATXN3-201ENST00000340660 SCAF8Q9UPN6 1271 aaKnown RBP15.5■□□□□ 0.07
ATXN3-201ENST00000340660 NIP7Q9Y221 180 aaKnown RBP eCLIP15.5■□□□□ 0.07
ATXN3-201ENST00000340660 PTPN12Q05209 780 aaKnown RBP15.49■□□□□ 0.07
ATXN3-201ENST00000340660 PRAMEF18Q5VWM3 479 aa15.49■□□□□ 0.07
ATXN3-201ENST00000340660 FAM109BQ6ICB4 259 aaPredicted RBP15.49■□□□□ 0.07
ATXN3-201ENST00000340660 ALYREFQ86V81 257 aaKnown RBP15.49■□□□□ 0.07
ATXN3-201ENST00000340660 TDHQ8IZJ6 230 aa15.49■□□□□ 0.07
ATXN3-201ENST00000340660 SUPT20HQ8NEM7 779 aa15.49■□□□□ 0.07
ATXN3-201ENST00000340660 CDH23Q9H251 3354 aa15.49■□□□□ 0.07
ATXN3-201ENST00000340660 ZNF646O15015 1829 aaPredicted RBP15.48■□□□□ 0.07
ATXN3-201ENST00000340660 GJA8P48165 433 aa15.48■□□□□ 0.07
ATXN3-201ENST00000340660 AEBP1Q8IUX7 1158 aa15.48■□□□□ 0.07
ATXN3-201ENST00000340660 CRAMP1Q96RY5 1269 aa15.48■□□□□ 0.07
ATXN3-201ENST00000340660 TTLL12Q14166 644 aaPredicted RBP15.47■□□□□ 0.07
ATXN3-201ENST00000340660 TJAP1Q5JTD0 557 aa15.47■□□□□ 0.07
ATXN3-201ENST00000340660 L3MBTL2Q969R5 705 aa15.47■□□□□ 0.07
ATXN3-201ENST00000340660 ZNF496Q96IT1 587 aaPredicted RBP15.47■□□□□ 0.07
ATXN3-201ENST00000340660 POLKQ9UBT6 870 aa15.47■□□□□ 0.07
ATXN3-201ENST00000340660 ATP6V0A2Q9Y487 856 aa15.47■□□□□ 0.07
ATXN3-201ENST00000340660 BDP1A6H8Y1 2624 aa15.46■□□□□ 0.07
ATXN3-201ENST00000340660 MANSC4A6NHS7 340 aaPredicted RBP15.46■□□□□ 0.07
ATXN3-201ENST00000340660 FARP2O94887 1054 aaPredicted RBP15.46■□□□□ 0.07
ATXN3-201ENST00000340660 TNNT2P45379 298 aaPredicted RBP15.46■□□□□ 0.07
ATXN3-201ENST00000340660 TCIRG1Q13488 830 aa15.46■□□□□ 0.07
ATXN3-201ENST00000340660 NUTM1Q86Y26 1132 aa15.46■□□□□ 0.07
ATXN3-201ENST00000340660 NKX2-3Q8TAU0 364 aa15.46■□□□□ 0.07
ATXN3-201ENST00000340660 SEMA3EO15041 775 aa15.45■□□□□ 0.06
ATXN3-201ENST00000340660 RNMTO43148 476 aaKnown RBP15.45■□□□□ 0.06
ATXN3-201ENST00000340660 RPS12P25398 132 aaKnown RBP15.45■□□□□ 0.06
ATXN3-201ENST00000340660 GTF2E1P29083 439 aaPredicted RBP15.45■□□□□ 0.06
ATXN3-201ENST00000340660 INHBEP58166 350 aa15.45■□□□□ 0.06
ATXN3-201ENST00000340660 SCARF1Q14162 830 aa15.45■□□□□ 0.06
ATXN3-201ENST00000340660 NPM2Q86SE8 214 aaKnown RBP15.45■□□□□ 0.06
ATXN3-201ENST00000340660 ZNF652Q9Y2D9 606 aa15.45■□□□□ 0.06
ATXN3-201ENST00000340660 PIP4K2AP48426 406 aaPredicted RBP15.44■□□□□ 0.06
ATXN3-201ENST00000340660 PPP4CP60510 307 aa15.44■□□□□ 0.06
ATXN3-201ENST00000340660 PTGDRQ13258 359 aa15.44■□□□□ 0.06
ATXN3-201ENST00000340660 DPP8Q6V1X1 898 aaPredicted RBP15.44■□□□□ 0.06
ATXN3-201ENST00000340660 RBM17Q96I25 401 aaKnown RBP15.44■□□□□ 0.06
ATXN3-201ENST00000340660 CDX2Q99626 313 aaPredicted RBP15.44■□□□□ 0.06
ATXN3-201ENST00000340660 HEG1Q9ULI3 1381 aa15.44■□□□□ 0.06
ATXN3-201ENST00000340660 KCNQ5Q9NR82 932 aa15.43■□□□□ 0.06
ATXN3-201ENST00000340660 RTL9Q8NET4 1388 aa15.43■□□□□ 0.06
ATXN3-201ENST00000340660 SSC5DA1L4H1 1573 aa15.43■□□□□ 0.06
ATXN3-201ENST00000340660 GJB1P08034 283 aa15.42■□□□□ 0.06
ATXN3-201ENST00000340660 ZMYND8Q9ULU4 1186 aaPredicted RBP15.42■□□□□ 0.06
ATXN3-201ENST00000340660 ALPK3Q96L96 1907 aa15.42■□□□□ 0.06
ATXN3-201ENST00000340660 DUOX1Q9NRD9 1551 aa15.41■□□□□ 0.06
ATXN3-201ENST00000340660 MAGEA10P43363 369 aaPredicted RBP15.41■□□□□ 0.06
ATXN3-201ENST00000340660 LDLRAD1Q5T700 205 aa15.41■□□□□ 0.06
ATXN3-201ENST00000340660 TEX13AQ9BXU3 409 aaPredicted RBP15.41■□□□□ 0.06
ATXN3-201ENST00000340660 LAMB1P07942 1786 aa15.4■□□□□ 0.06
ATXN3-201ENST00000340660 ARHGAP39Q9C0H5 1083 aa15.4■□□□□ 0.06
ATXN3-201ENST00000340660 TMX4Q9H1E5 349 aaPredicted RBP15.4■□□□□ 0.06
ATXN3-201ENST00000340660 DBNDD1Q9H9R9 158 aa15.4■□□□□ 0.06
ATXN3-201ENST00000340660 HCN4Q9Y3Q4 1203 aa15.4■□□□□ 0.06
ATXN3-201ENST00000340660 ZSWIM8A7E2V4 1837 aa15.4■□□□□ 0.06
ATXN3-201ENST00000340660 MUC6Q6W4X9 2439 aa15.39■□□□□ 0.05
ATXN3-201ENST00000340660 ARHGEF6Q15052 776 aa15.39■□□□□ 0.05
ATXN3-201ENST00000340660 TTC5Q8N0Z6 440 aa15.39■□□□□ 0.05
ATXN3-201ENST00000340660 PTPN18Q99952 460 aa15.39■□□□□ 0.05
ATXN3-201ENST00000340660 COL2A1P02458 1487 aaPredicted RBP15.39■□□□□ 0.05
ATXN3-201ENST00000340660 CCL5P13501 91 aa15.38■□□□□ 0.05
ATXN3-201ENST00000340660 KCNC4Q03721 635 aa15.38■□□□□ 0.05
ATXN3-201ENST00000340660 PRKG1Q13976 671 aa15.38■□□□□ 0.05
ATXN3-201ENST00000340660 HLFQ16534 295 aa15.38■□□□□ 0.05
ATXN3-201ENST00000340660 NCOR1O75376 2440 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 RGS20O76081 388 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 ZNF280AP59817 542 aaPredicted RBP15.37■□□□□ 0.05
ATXN3-201ENST00000340660 C7orf61Q8IZ16 206 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 U2AF1L4Q8WU68 220 aaKnown RBP15.37■□□□□ 0.05
ATXN3-201ENST00000340660 WNK4Q96J92 1243 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 TESK2Q96S53 571 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 P2RX7Q99572 595 aaKnown RBP15.37■□□□□ 0.05
ATXN3-201ENST00000340660 UBE2OQ9C0C9 1292 aaKnown RBP15.37■□□□□ 0.05
ATXN3-201ENST00000340660 TAF1P21675 1872 aa15.37■□□□□ 0.05
ATXN3-201ENST00000340660 ZBTB48P10074 688 aaPredicted RBP15.36■□□□□ 0.05
ATXN3-201ENST00000340660 SYN1P17600 705 aa15.36■□□□□ 0.05
ATXN3-201ENST00000340660 ZNF697Q5TEC3 545 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms