RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 GRM1Q13255 1194 aa21.46■■□□□ 1.03
BRCC3-202ENST00000340647 PRAMEF18Q5VWM3 479 aa21.46■■□□□ 1.03
BRCC3-202ENST00000340647 SULF1Q8IWU6 871 aa21.46■■□□□ 1.03
BRCC3-202ENST00000340647 TDRD7Q8NHU6 1098 aaKnown RBP21.46■■□□□ 1.03
BRCC3-202ENST00000340647 HUNKP57058 714 aa21.45■■□□□ 1.02
BRCC3-202ENST00000340647 PAXIP1Q6ZW49 1069 aaPredicted RBP21.45■■□□□ 1.02
BRCC3-202ENST00000340647 PAPPA2Q9BXP8 1791 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 MAP2K2P36507 400 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 PTPN12Q05209 780 aaKnown RBP21.44■■□□□ 1.02
BRCC3-202ENST00000340647 ZNF804AQ7Z570 1209 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 FBXO33Q7Z6M2 555 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 FAM205AQ6ZU69 1335 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 MROH5Q6ZUA9 1318 aa21.44■■□□□ 1.02
BRCC3-202ENST00000340647 FKBP1AP62942 108 aaKnown RBP21.43■■□□□ 1.02
BRCC3-202ENST00000340647 MOB2Q70IA6 237 aa21.43■■□□□ 1.02
BRCC3-202ENST00000340647 ATG9AQ7Z3C6 839 aa21.43■■□□□ 1.02
BRCC3-202ENST00000340647 OGFOD1Q8N543 542 aa21.43■■□□□ 1.02
BRCC3-202ENST00000340647 BCAR3O75815 825 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 PDE8BO95263 885 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 FGFR2P21802 821 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 GRIK5Q16478 980 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 MTMR14Q8NCE2 650 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 MEIS3Q99687 375 aa21.42■■□□□ 1.02
BRCC3-202ENST00000340647 MYH13Q9UKX3 1938 aa21.41■■□□□ 1.02
BRCC3-202ENST00000340647 MMP14P50281 582 aa21.41■■□□□ 1.02
BRCC3-202ENST00000340647 INTS3Q68E01 1043 aaKnown RBP21.41■■□□□ 1.02
BRCC3-202ENST00000340647 RGMBQ6NW40 437 aa21.41■■□□□ 1.02
BRCC3-202ENST00000340647 ARHGAP45Q92619 1136 aa21.41■■□□□ 1.02
BRCC3-202ENST00000340647 API5Q9BZZ5 524 aaKnown RBP21.41■■□□□ 1.02
BRCC3-202ENST00000340647 CASP8AP2Q9UKL3 1982 aa21.4■■□□□ 1.02
BRCC3-202ENST00000340647 F8W031 263 aaPredicted RBP21.4■■□□□ 1.02
BRCC3-202ENST00000340647 HIBADHP31937 336 aaKnown RBP21.4■■□□□ 1.02
BRCC3-202ENST00000340647 C2orf69Q8N8R5 385 aa21.4■■□□□ 1.02
BRCC3-202ENST00000340647 PRMT6Q96LA8 375 aaPredicted RBP21.4■■□□□ 1.02
BRCC3-202ENST00000340647 TSKSQ9UJT2 592 aa21.4■■□□□ 1.02
BRCC3-202ENST00000340647 METTL24Q5JXM2 366 aa21.39■■□□□ 1.01
BRCC3-202ENST00000340647 LRRFIP2Q9Y608 721 aaKnown RBP21.39■■□□□ 1.01
BRCC3-202ENST00000340647 AKAP11Q9UKA4 1901 aa21.38■■□□□ 1.01
BRCC3-202ENST00000340647 EYA2O00167 538 aa21.38■■□□□ 1.01
BRCC3-202ENST00000340647 TRIM27P14373 513 aa21.38■■□□□ 1.01
BRCC3-202ENST00000340647 HDAC9Q9UKV0 1011 aa21.38■■□□□ 1.01
BRCC3-202ENST00000340647 IQSEC3Q9UPP2 1182 aaPredicted RBP21.38■■□□□ 1.01
BRCC3-202ENST00000340647 SSC5DA1L4H1 1573 aa21.37■■□□□ 1.01
BRCC3-202ENST00000340647 UBTFL1P0CB47 393 aaPredicted RBP21.37■■□□□ 1.01
BRCC3-202ENST00000340647 BCAMP50895 628 aa21.37■■□□□ 1.01
BRCC3-202ENST00000340647 HNRNPUQ00839 825 aaKnown RBP eCLIP21.37■■□□□ 1.01
BRCC3-202ENST00000340647 CFAP100Q494V2 611 aa21.37■■□□□ 1.01
BRCC3-202ENST00000340647 KIF16BQ96L93 1317 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 SPDYE2BA6NHP3 402 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 SLC10A3P09131 477 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 SPDYE6P0CI01 402 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 NOGQ13253 232 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 MFSD14BQ5SR56 506 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 BEGAINQ9BUH8 593 aa21.36■■□□□ 1.01
BRCC3-202ENST00000340647 PA2G4Q9UQ80 394 aaKnown RBP21.36■■□□□ 1.01
BRCC3-202ENST00000340647 COL1A1P02452 1464 aaPredicted RBP21.35■■□□□ 1.01
BRCC3-202ENST00000340647 UBE2Q2LH0YL09 131 aa21.35■■□□□ 1.01
BRCC3-202ENST00000340647 ZNF157P51786 506 aaPredicted RBP21.35■■□□□ 1.01
BRCC3-202ENST00000340647 DLGAP5Q15398 846 aa21.35■■□□□ 1.01
BRCC3-202ENST00000340647 RASAL3Q86YV0 1011 aa21.35■■□□□ 1.01
BRCC3-202ENST00000340647 FZD1Q9UP38 647 aa21.35■■□□□ 1.01
BRCC3-202ENST00000340647 FKBP1BP68106 108 aa21.34■■□□□ 1.01
BRCC3-202ENST00000340647 KIF23Q02241 960 aaPredicted RBP21.34■■□□□ 1.01
BRCC3-202ENST00000340647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.34■■□□□ 1.01
BRCC3-202ENST00000340647 CLRN2A0PK11 232 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 CCDC85CA6NKD9 419 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 PUM3Q15397 648 aaKnown RBP21.33■■□□□ 1.01
BRCC3-202ENST00000340647 ATF7IPQ6VMQ6 1270 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 APOBEC3FQ8IUX4 373 aaKnown RBP21.33■■□□□ 1.01
BRCC3-202ENST00000340647 CCDC102AQ96A19 550 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 SIL1Q9H173 461 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 DEFB129Q9H1M3 183 aa21.33■■□□□ 1.01
BRCC3-202ENST00000340647 TTF2Q9UNY4 1162 aaKnown RBP21.33■■□□□ 1.01
BRCC3-202ENST00000340647 LAMB1P07942 1786 aa21.33■■□□□ 1
BRCC3-202ENST00000340647 CIAO1O76071 339 aa21.32■■□□□ 1
BRCC3-202ENST00000340647 CSRNP1Q96S65 589 aa21.32■■□□□ 1
BRCC3-202ENST00000340647 COPRSQ9NQ92 184 aa21.32■■□□□ 1
BRCC3-202ENST00000340647 OTOFQ9HC10 1997 aa21.32■■□□□ 1
BRCC3-202ENST00000340647 RGS19P49795 217 aa21.31■■□□□ 1
BRCC3-202ENST00000340647 FBXO3Q9UK99 471 aa21.31■■□□□ 1
BRCC3-202ENST00000340647 CHAF1AQ13111 956 aaPredicted RBP21.3■■□□□ 1
BRCC3-202ENST00000340647 MTX1Q13505 466 aa21.3■■□□□ 1
BRCC3-202ENST00000340647 LDLRAD1Q5T700 205 aa21.3■■□□□ 1
BRCC3-202ENST00000340647 LPIN2Q92539 896 aa21.3■■□□□ 1
BRCC3-202ENST00000340647 CLUAP1Q96AJ1 413 aa21.3■■□□□ 1
BRCC3-202ENST00000340647 SERPINA10Q9UK55 444 aa21.3■■□□□ 1
BRCC3-202ENST00000340647 SLC34A2O95436 690 aa21.29■■□□□ 1
BRCC3-202ENST00000340647 SPDYE2Q495Y8 402 aa21.29■■□□□ 1
BRCC3-202ENST00000340647 CAVIN4Q5BKX8 364 aa21.29■■□□□ 1
BRCC3-202ENST00000340647 CDAN1Q8IWY9 1227 aa21.29■■□□□ 1
BRCC3-202ENST00000340647 DZIP1LQ8IYY4 767 aaKnown RBP21.29■■□□□ 1
BRCC3-202ENST00000340647 FRAT1Q92837 279 aaPredicted RBP21.29■■□□□ 1
BRCC3-202ENST00000340647 IFIT1P09914 478 aaKnown RBP21.28■■□□□ 1
BRCC3-202ENST00000340647 CRKP46108 304 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 PRKG1Q13976 671 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 NBPF12Q5TAG4 269 aaPredicted RBP21.28■■□□□ 1
BRCC3-202ENST00000340647 VPS37DQ86XT2 251 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 TMEM57Q8N5G2 664 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 MCOLN1Q9GZU1 580 aa21.28■■□□□ 1
BRCC3-202ENST00000340647 TDRD3Q9H7E2 651 aaKnown RBP21.28■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms