RNA–Protein interactions for RNA: ENST00000336604.8

IFFO1-201, Transcript of intermediate filament family orphan 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene IFFO1, Length 2,686 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFFO1-201ENST00000336604 PDCL2Q8N4E4 241 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 FSIP1Q8NA03 581 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 CACTINQ8WUQ7 758 aaKnown RBP20.82■□□□□ 0.92
IFFO1-201ENST00000336604 STX1AQ16623 288 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 C16orf45Q96MC5 204 aaPredicted RBP20.82■□□□□ 0.92
IFFO1-201ENST00000336604 ISCA1Q9BUE6 129 aa20.82■□□□□ 0.92
IFFO1-201ENST00000336604 PUS7LQ9H0K6 701 aaKnown RBP20.82■□□□□ 0.92
IFFO1-201ENST00000336604 CTAGE5O15320 804 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 FBXW7Q969H0 707 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 ZAP70P43403 619 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 TCIRG1Q13488 830 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 IMMTQ16891 758 aaKnown RBP20.81■□□□□ 0.92
IFFO1-201ENST00000336604 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.81■□□□□ 0.92
IFFO1-201ENST00000336604 STRCP1A6NGW2 1772 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 GJB4Q9NTQ9 266 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 PCDHA7Q9UN72 937 aa20.81■□□□□ 0.92
IFFO1-201ENST00000336604 POLR3DP05423 398 aaPredicted RBP20.8■□□□□ 0.92
IFFO1-201ENST00000336604 U2AF2P26368 475 aaKnown RBP eCLIP20.8■□□□□ 0.921e-9■■■■□ 21.9
IFFO1-201ENST00000336604 EVCP57679 992 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 ATL3Q6DD88 541 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 SYNE4Q8N205 404 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 UBR2Q8IWV8 1755 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 PRC1O43663 620 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 IL2RBP14784 551 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 NKX1-1Q15270 411 aaPredicted RBP20.8■□□□□ 0.92
IFFO1-201ENST00000336604 TAF7LQ5H9L4 462 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 CTNNA3Q9UI47 895 aa20.8■□□□□ 0.92
IFFO1-201ENST00000336604 KLF18A0A0U1RQI7 1052 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 ARID5BQ14865 1188 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 AKAP2Q9Y2D5 859 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 A0A1B0GVL5 298 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 GOLGA8BA8MQT2 603 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 BECN2A8MW95 431 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 FBXL16Q8N461 479 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 STRN4Q9NRL3 753 aa20.79■□□□□ 0.92
IFFO1-201ENST00000336604 BRINP3Q76B58 766 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 DHX40Q8IX18 779 aaKnown RBP20.78■□□□□ 0.92
IFFO1-201ENST00000336604 HPS5Q9UPZ3 1129 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 CLIC4Q9Y696 253 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 MYH15Q9Y2K3 1946 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 ANTXR2P58335 489 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 SARM1Q6SZW1 724 aa20.78■□□□□ 0.92
IFFO1-201ENST00000336604 MB21D2Q8IYB1 491 aaPredicted RBP20.78■□□□□ 0.92
IFFO1-201ENST00000336604 GTPBP4Q9BZE4 634 aaKnown RBP20.78■□□□□ 0.92
IFFO1-201ENST00000336604 ZFYP08048 801 aaPredicted RBP20.77■□□□□ 0.92
IFFO1-201ENST00000336604 IFIT5Q13325 482 aaKnown RBP20.77■□□□□ 0.92
IFFO1-201ENST00000336604 LRRFIP1Q32MZ4 808 aaKnown RBP20.77■□□□□ 0.92
IFFO1-201ENST00000336604 FMR1NBQ8N0W7 255 aaPredicted RBP20.77■□□□□ 0.92
IFFO1-201ENST00000336604 MRPS27Q92552 414 aaKnown RBP20.77■□□□□ 0.92
IFFO1-201ENST00000336604 APPBP2Q92624 585 aa20.77■□□□□ 0.92
IFFO1-201ENST00000336604 C8orf76Q96K31 380 aa20.77■□□□□ 0.92
IFFO1-201ENST00000336604 RTEL1Q9NZ71 1219 aa20.77■□□□□ 0.92
IFFO1-201ENST00000336604 CDC25BP30305 580 aa20.77■□□□□ 0.92
IFFO1-201ENST00000336604 COL5A2P05997 1499 aaPredicted RBP20.77■□□□□ 0.91
IFFO1-201ENST00000336604 GPAA1O43292 621 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 NDUFA8P51970 172 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 LINC00301Q8NCQ3 95 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 SDF4Q9BRK5 362 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 ANO10Q9NW15 660 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 ORC3Q9UBD5 711 aaPredicted RBP20.76■□□□□ 0.91
IFFO1-201ENST00000336604 DENND2AQ9ULE3 1009 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 SPEF2Q9C093 1822 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 NWD2Q9ULI1 1742 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 TNS2Q63HR2 1409 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 ADALQ6DHV7 355 aa20.76■□□□□ 0.91
IFFO1-201ENST00000336604 LRRC8AQ8IWT6 810 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 DNAJC10Q8IXB1 793 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 AOPEPQ8N6M6 819 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 FBXO18Q8NFZ0 1043 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 MRFAP1L1Q96HT8 127 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 ASAP1Q9ULH1 1129 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 ZNF213O14771 459 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 PCCAP05165 728 aaPredicted RBP20.75■□□□□ 0.91
IFFO1-201ENST00000336604 STK38Q15208 465 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 SF3A1Q15459 793 aaKnown RBP20.75■□□□□ 0.91
IFFO1-201ENST00000336604 RALYLQ86SE5 291 aaKnown RBP20.75■□□□□ 0.91
IFFO1-201ENST00000336604 NCOA7Q8NI08 942 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 CHMP4CQ96CF2 233 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 TMOD3Q9NYL9 352 aa20.75■□□□□ 0.91
IFFO1-201ENST00000336604 CPLX1O14810 134 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 GPTP24298 496 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 MCAMP43121 646 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 FILIP1Q7Z7B0 1213 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
IFFO1-201ENST00000336604 CSF1RP07333 972 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 TNNT1P13805 278 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 METTL24Q5JXM2 366 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 CEP57L1Q8IYX8 460 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 ZBTB38Q8NAP3 1195 aaPredicted RBP20.74■□□□□ 0.91
IFFO1-201ENST00000336604 NKX2-3Q8TAU0 364 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 FBXO3Q9UK99 471 aa20.74■□□□□ 0.91
IFFO1-201ENST00000336604 TRIM28Q13263 835 aaKnown RBP20.73■□□□□ 0.91
IFFO1-201ENST00000336604 KIF6Q6ZMV9 814 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 CARD10Q9BWT7 1032 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 BCL11BQ9C0K0 894 aaPredicted RBP20.73■□□□□ 0.91
IFFO1-201ENST00000336604 TAOK2Q9UL54 1235 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 KIF28PB7ZC32 967 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 LDHAL6AQ6ZMR3 332 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 GREM2Q9H772 168 aa20.73■□□□□ 0.91
IFFO1-201ENST00000336604 CTIFO43310 598 aaKnown RBP20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 8 ms