RNA–Protein interactions for RNA: ENST00000333479.11

KNTC1-201, Transcript of kinetochore associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KNTC1, Length 6,975 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-201ENST00000333479 MTFR1LQ9H019 292 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 TCP11L1Q9NUJ3 509 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 RABGAP1Q9Y3P9 1069 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 MAGI3Q5TCQ9 1506 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 NPATQ14207 1427 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 HOXC6P09630 235 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 VPS72Q15906 364 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 KIAA1841Q6NSI8 718 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 RRP36Q96EU6 259 aaKnown RBP4.38□□□□□ -1.71
KNTC1-201ENST00000333479 NOX5Q96PH1 765 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 GAS2L1Q99501 681 aaPredicted RBP4.38□□□□□ -1.71
KNTC1-201ENST00000333479 FAM8A1Q9UBU6 413 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 GTF3C3Q9Y5Q9 886 aa4.38□□□□□ -1.71
KNTC1-201ENST00000333479 GOLGA8CPA6NN73 597 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 YARSP54577 528 aaKnown RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CBX1P83916 185 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 TEX11Q8IYF3 940 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 KIF1BPQ96EK5 621 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CARD10Q9BWT7 1032 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MSRAQ9UJ68 235 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 GTF3C5Q9Y5Q8 519 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MAP4K4O95819 1239 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 VEGFAP15692 232 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PDE4DQ08499 809 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 ATP2B3Q16720 1220 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 IQSEC3Q9UPP2 1182 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SLC12A7Q9Y666 1083 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PLXNC1O60486 1568 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 KDM5DQ9BY66 1539 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SMTNP53814 917 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CCDC15Q0P6D6 951 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CUL4BQ13620 913 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SYCP3Q8IZU3 236 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PTPRMP28827 1452 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PTPRTO14522 1441 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PARD3Q8TEW0 1356 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 ARHGEF12Q9NZN5 1544 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 RNF123Q5XPI4 1314 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SEPT7Q16181 437 aaKnown RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 B4GALNT3Q6L9W6 998 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 HAUS6Q7Z4H7 955 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 METTL23Q86XA0 190 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CLUAP1Q96AJ1 413 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 TRIM47Q96LD4 638 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SYNCQ9H7C4 482 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 NRBP2Q9NSY0 501 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CEP83Q9Y592 693 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CYP46A1Q9Y6A2 500 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SPATA31D1Q6ZQQ2 1576 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SHTN1A0MZ66 631 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PLEKHG3A1L390 1219 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PDE8AO60658 829 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 AAK1Q2M2I8 961 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MSL1Q68DK7 614 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 GSDMBQ8TAX9 411 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 ADPGKQ9BRR6 497 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PAGR1Q9BTK6 254 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.37□□□□□ -1.715e-7■■■■□ 21.2
KNTC1-201ENST00000333479 POLR3AO14802 1390 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 TFRCP02786 760 aaKnown RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 XRCC6P12956 609 aaKnown RBP eCLIP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 LIG1P18858 919 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 CYP7A1P22680 504 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 ZNF157P51786 506 aaPredicted RBP4.37□□□□□ -1.71
KNTC1-201ENST00000333479 PTPAQ15257 358 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MFSD6Q6ZSS7 791 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 FAM114A1Q8IWE2 563 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 KCNG4Q8TDN1 519 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 SKA1Q96BD8 255 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 LZTS2Q9BRK4 669 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 ZNF341Q9BYN7 854 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MLXIPQ9HAP2 919 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 LMCD1Q9NZU5 365 aa4.37□□□□□ -1.71
KNTC1-201ENST00000333479 MAGEB6P1A0A0J9YX57 407 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 RPS12P25398 132 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 ERCC4Q92889 916 aaPredicted RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 PIDD1Q9HB75 910 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 FERP16591 822 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 GNA11P29992 359 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 PRIM1P49642 420 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 BPIFB4P59827 614 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 STRN3Q13033 797 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 ZBTB8OSQ8IWT0 167 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 CDHR1Q96JP9 859 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 RUFY1Q96T51 708 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 SRPRBQ9Y5M8 271 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 SCAF11Q99590 1463 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 FAM135BQ49AJ0 1406 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 SEMA3EO15041 775 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 SERPINB2P05120 415 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 POLR2BP30876 1174 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 GOLGA8FQ08AF8 430 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 GOLGA8DPQ0D2H9 430 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 PRKG1Q13976 671 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 RRS1Q15050 365 aaKnown RBP4.36□□□□□ -1.71
KNTC1-201ENST00000333479 FKBP15Q5T1M5 1219 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 RABGGTAQ92696 567 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 RNF34Q969K3 372 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 LEMD3Q9Y2U8 911 aa4.36□□□□□ -1.71
KNTC1-201ENST00000333479 PLEKHG2Q9H7P9 1386 aa4.36□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms