RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 RIMS1Q86UR5 1692 aaKnown RBP11.04□□□□□ -0.64
SS18L1-201ENST00000331758 RIMBP2O15034 1052 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 LRSAM1Q6UWE0 723 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 NLRP10Q86W26 655 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 SPATA5Q8NB90 893 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 IPO7O95373 1038 aaKnown RBP11.04□□□□□ -0.64
SS18L1-201ENST00000331758 HLFQ16534 295 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 ME3Q16798 604 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 CCDC102BQ68D86 513 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 SYNE4Q8N205 404 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 ZC3H12CQ9C0D7 883 aaKnown RBP11.04□□□□□ -0.64
SS18L1-201ENST00000331758 ANKRD2Q9GZV1 360 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 ATG3Q9NT62 314 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 CEP131Q9UPN4 1083 aa11.04□□□□□ -0.64
SS18L1-201ENST00000331758 PRDM1O75626 825 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 GNAT2P19087 354 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 HIBADHP31937 336 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ZNF589Q86UQ0 364 aaPredicted RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 TM6SF1Q9BZW5 370 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ANTXR1Q9H6X2 564 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 SEC63Q9UGP8 760 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 MROH5Q6ZUA9 1318 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 JAK2O60674 1132 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 MARCKSP29966 332 aaPredicted RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ZNF165P49910 485 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 PI16Q6UXB8 463 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 TMTC2Q8N394 836 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 CCDC43Q96MW1 224 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ANO10Q9NW15 660 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 MYO5BQ9ULV0 1848 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 COL3A1P02461 1466 aaPredicted RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 EPB41L2O43491 1005 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 PHKA1P46020 1223 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 RPS8P62241 208 aaKnown RBP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 CCDC96Q2M329 555 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ZNF804AQ7Z570 1209 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 SEC31BQ9NQW1 1179 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 H7C1W4 665 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 PDE8BO95263 885 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 SSBP05455 408 aaKnown RBP eCLIP11.03□□□□□ -0.64
SS18L1-201ENST00000331758 CLCN1P35523 988 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 BCAMP50895 628 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 MTX1Q13505 466 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 USPL1Q5W0Q7 1092 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 OTUD7BQ6GQQ9 843 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 ZSCAN30Q86W11 494 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 UBE2Q2Q8WVN8 375 aa11.03□□□□□ -0.64
SS18L1-201ENST00000331758 E7EWF7 191 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 LDHBP07195 334 aaKnown RBP11.02□□□□□ -0.64
SS18L1-201ENST00000331758 HSPD1P10809 573 aaKnown RBP11.02□□□□□ -0.64
SS18L1-201ENST00000331758 GYG1P46976 350 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 PICALMQ13492 652 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 KLHL10Q6JEL2 608 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 DENND2AQ9ULE3 1009 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 SSH2Q76I76 1423 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 SIGLEC1Q9BZZ2 1709 aa11.02□□□□□ -0.64
SS18L1-201ENST00000331758 KIF5BP33176 963 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 DHX8Q14562 1220 aaKnown RBP11.02□□□□□ -0.65
SS18L1-201ENST00000331758 CNNM3Q8NE01 707 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 MAP4K1Q92918 833 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 ZHX3Q9H4I2 956 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 CCDC194A0A1B0GVG4 234 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 GSTO1P78417 241 aa11.02□□□□□ -0.65
SS18L1-201ENST00000331758 TSPY3P0CV98 308 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 TSPY8P0CW00 308 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 FILIP1LQ4L180 1135 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 MYL10Q9BUA6 226 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 UFL1O94874 794 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 DSCC1Q9BVC3 393 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 TPCN1Q9ULQ1 816 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 CTAGE5O15320 804 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 KRT18P05783 430 aaKnown RBP11.01□□□□□ -0.65
SS18L1-201ENST00000331758 CTDSPL2Q05D32 466 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 ZSWIM6Q9HCJ5 1215 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 USP32Q8NFA0 1604 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 BRD1O95696 1058 aa11.01□□□□□ -0.65
SS18L1-201ENST00000331758 ANGEL1Q9UNK9 670 aaKnown RBP11.01□□□□□ -0.65
SS18L1-201ENST00000331758 MYOM1P52179 1685 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 PDE6AP16499 860 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 CFAP100Q494V2 611 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 DACH1Q9UI36 760 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 ADCY5O95622 1261 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 FGAP02671 866 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 CDC37L1Q7L3B6 337 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 AATFQ9NY61 560 aaKnown RBP eCLIP11□□□□□ -0.65
SS18L1-201ENST00000331758 FBXO3Q9UK99 471 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 SNAP23O00161 211 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 CHRNDQ07001 517 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 LMBRD1Q9NUN5 540 aa11□□□□□ -0.65
SS18L1-201ENST00000331758 GADD45BO75293 160 aaPredicted RBP10.99□□□□□ -0.65
SS18L1-201ENST00000331758 CIAO1O76071 339 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 CYP21A2P08686 494 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 TTLL11Q8NHH1 800 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 CEMIPQ8WUJ3 1361 aa10.99□□□□□ -0.65
SS18L1-201ENST00000331758 SLFNL1Q499Z3 407 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 111.2 ms