RNA–Protein interactions for RNA: ENST00000317201.6

HOXA3-201, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene HOXA3, Length 2,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-201ENST00000317201 CWC27Q6UX04 472 aaKnown RBP17.37■□□□□ 0.37
HOXA3-201ENST00000317201 CCDC85AQ96PX6 553 aaPredicted RBP17.37■□□□□ 0.37
HOXA3-201ENST00000317201 FSD1Q9BTV5 496 aa17.37■□□□□ 0.37
HOXA3-201ENST00000317201 ARAP2Q8WZ64 1704 aa17.37■□□□□ 0.37
HOXA3-201ENST00000317201 TBC1D9BQ66K14 1250 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 CHAMP1Q96JM3 812 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 IL25Q9H293 177 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 UBR3Q6ZT12 1888 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 PDE8BO95263 885 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 PIBF1Q8WXW3 757 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 ZNF622Q969S3 477 aaKnown RBP eCLIP17.36■□□□□ 0.37
HOXA3-201ENST00000317201 SETDB2Q96T68 719 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 YY1AP1Q9H869 796 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 LRRC4BQ9NT99 713 aa17.36■□□□□ 0.37
HOXA3-201ENST00000317201 HNRNPH2P55795 449 aaKnown RBP17.35■□□□□ 0.37
HOXA3-201ENST00000317201 XAGE2Q96GT9 111 aa17.35■□□□□ 0.37
HOXA3-201ENST00000317201 CTNNA3Q9UI47 895 aa17.35■□□□□ 0.37
HOXA3-201ENST00000317201 KBTBD3Q8NAB2 608 aa17.35■□□□□ 0.37
HOXA3-201ENST00000317201 CT47A1Q5JQC4 288 aaPredicted RBP17.34■□□□□ 0.37
HOXA3-201ENST00000317201 CIZ1Q9ULV3 898 aaPredicted RBP17.34■□□□□ 0.37
HOXA3-201ENST00000317201 ST18O60284 1047 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 RFC4P35249 363 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 CDC5LQ99459 802 aaKnown RBP17.34■□□□□ 0.37
HOXA3-201ENST00000317201 MED23Q9ULK4 1368 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 K7ELQ4 463 aaPredicted RBP17.34■□□□□ 0.37
HOXA3-201ENST00000317201 IGHMBP2P38935 993 aaKnown RBP17.34■□□□□ 0.37
HOXA3-201ENST00000317201 ERFEQ4G0M1 354 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 KCNB2Q92953 911 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 PAG1Q9NWQ8 432 aa17.34■□□□□ 0.37
HOXA3-201ENST00000317201 PRPF40AO75400 957 aaKnown RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 IFIT1P09914 478 aaKnown RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 RAD51AP2Q09MP3 1159 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 NMIQ13287 307 aaPredicted RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 PUM3Q15397 648 aaKnown RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 MPHOSPH8Q99549 860 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 CASZ1Q86V15 1759 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 PLSCR1O15162 318 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 TRIM37O94972 964 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 TNNT1P13805 278 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 FGFR2P21802 821 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 LRRFIP1Q32MZ4 808 aaKnown RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 TPTE2Q6XPS3 522 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 LPIN2Q92539 896 aa17.33■□□□□ 0.36
HOXA3-201ENST00000317201 SRP68Q9UHB9 627 aaKnown RBP17.33■□□□□ 0.36
HOXA3-201ENST00000317201 TTC39AQ5SRH9 613 aa17.32■□□□□ 0.36
HOXA3-201ENST00000317201 MCM2P49736 904 aa17.32■□□□□ 0.36
HOXA3-201ENST00000317201 NCBP1Q09161 790 aaKnown RBP17.32■□□□□ 0.36
HOXA3-201ENST00000317201 AXDND1Q5T1B0 1012 aaPredicted RBP17.32■□□□□ 0.36
HOXA3-201ENST00000317201 GORABQ5T7V8 394 aa17.32■□□□□ 0.36
HOXA3-201ENST00000317201 EFCC1Q9HA90 598 aa17.32■□□□□ 0.36
HOXA3-201ENST00000317201 DDX41Q9UJV9 622 aaKnown RBP17.32■□□□□ 0.36
HOXA3-201ENST00000317201 CARMIL3Q8ND23 1372 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 CCDC171Q6TFL3 1326 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 RXRBP28702 533 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 AMIGO3Q86WK7 504 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 CNKSR2Q8WXI2 1034 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 TSPYL1Q9H0U9 437 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 NBPF5PQ86XG9 351 aaPredicted RBP17.31■□□□□ 0.36
HOXA3-201ENST00000317201 MAP4K1Q92918 833 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 FAM227BQ96M60 508 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 RGPD3A6NKT7 1758 aaPredicted RBP17.31■□□□□ 0.36
HOXA3-201ENST00000317201 RGPD4Q7Z3J3 1758 aa17.31■□□□□ 0.36
HOXA3-201ENST00000317201 ADORA1P30542 326 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 HELLSQ9NRZ9 838 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 A0A0D9SFI3 127 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 DHX16O60231 1041 aaKnown RBP17.3■□□□□ 0.36
HOXA3-201ENST00000317201 CHAF1AQ13111 956 aaPredicted RBP17.3■□□□□ 0.36
HOXA3-201ENST00000317201 GPT2Q8TD30 523 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 SEC31BQ9NQW1 1179 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 LMBRD1Q9NUN5 540 aa17.3■□□□□ 0.36
HOXA3-201ENST00000317201 NSFL1CQ9UNZ2 370 aaKnown RBP17.3■□□□□ 0.36
HOXA3-201ENST00000317201 UQCRFS1P1P0C7P4 283 aa17.29■□□□□ 0.36
HOXA3-201ENST00000317201 NOP2P46087 812 aaKnown RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 FAM43BQ6ZT52 329 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 TMEM63CQ9P1W3 806 aa17.29■□□□□ 0.36
HOXA3-201ENST00000317201 PALD1Q9ULE6 856 aa17.29■□□□□ 0.36
HOXA3-201ENST00000317201 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 SLC5A1P13866 664 aa17.29■□□□□ 0.36
HOXA3-201ENST00000317201 ARID4AP29374 1257 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 EDC3Q96F86 508 aaKnown RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 NLRP3Q96P20 1036 aa17.29■□□□□ 0.36
HOXA3-201ENST00000317201 BSDC1Q9NW68 430 aaPredicted RBP17.29■□□□□ 0.36
HOXA3-201ENST00000317201 GOLIM4O00461 696 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 TXNRD1Q16881 649 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 MCMDC2Q4G0Z9 681 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.28■□□□□ 0.36
HOXA3-201ENST00000317201 NECTIN1Q15223 517 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 BICDL1Q6ZP65 573 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 DDX46Q7L014 1031 aaKnown RBP17.28■□□□□ 0.36
HOXA3-201ENST00000317201 ANKRD18AQ8IVF6 992 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 C10orf67Q8IYJ2 551 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 TRIM66O15016 1216 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 PKP1Q13835 747 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 LRSAM1Q6UWE0 723 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 TM6SF1Q9BZW5 370 aa17.28■□□□□ 0.36
HOXA3-201ENST00000317201 A0A1B0GUL6 1792 aa17.27■□□□□ 0.36
HOXA3-201ENST00000317201 PTH1RQ03431 593 aa17.27■□□□□ 0.36
HOXA3-201ENST00000317201 TTF1Q15361 905 aaPredicted RBP17.27■□□□□ 0.36
HOXA3-201ENST00000317201 SMIM5Q71RC9 77 aa17.27■□□□□ 0.36
HOXA3-201ENST00000317201 SNX14Q9Y5W7 946 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms