RNA–Protein interactions for RNA: ENST00000309641.10

PDE4D-201, Transcript of phosphodiesterase 4D, humanhuman

TSL 1 (best)

Gene PDE4D, Length 2,025 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4D-201ENST00000309641 RASGRF1Q13972 1273 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 TNIP1Q15025 636 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 STRIP1Q5VSL9 837 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 RSBN1LQ6PCB5 846 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-201ENST00000309641 GMLQ99445 158 aa11.19□□□□□ -0.62
PDE4D-201ENST00000309641 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
PDE4D-201ENST00000309641 KDM2BQ8NHM5 1336 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 FRAT2O75474 233 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-201ENST00000309641 EGFRP00533 1210 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 GORABQ5T7V8 394 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 CLASRPQ8N2M8 674 aaKnown RBP11.18□□□□□ -0.62
PDE4D-201ENST00000309641 OTUD7AQ8TE49 926 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-201ENST00000309641 L3MBTL3Q96JM7 780 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-201ENST00000309641 NDUFB9Q9Y6M9 179 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 FAM205AQ6ZU69 1335 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 MCAMP43121 646 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 ANKRD45Q5TZF3 282 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 B4GALNT3Q6L9W6 998 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 SMC5Q8IY18 1101 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 RWDD1Q9H446 243 aaPredicted RBP11.18□□□□□ -0.62
PDE4D-201ENST00000309641 GPRC5DQ9NZD1 345 aa11.18□□□□□ -0.62
PDE4D-201ENST00000309641 WDR90Q96KV7 1748 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 F8W031 263 aaPredicted RBP11.17□□□□□ -0.62
PDE4D-201ENST00000309641 POTEIP0CG38 1075 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 POTEJP0CG39 1038 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 MFSD14BQ5SR56 506 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 TSHZ3Q63HK5 1081 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 KIAA0825Q8IV33 1275 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 SNRKQ9NRH2 765 aa11.17□□□□□ -0.62
PDE4D-201ENST00000309641 CNOT7Q9UIV1 285 aaKnown RBP11.17□□□□□ -0.62
PDE4D-201ENST00000309641 KIF3CO14782 793 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 ARID4AP29374 1257 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-201ENST00000309641 SAMD7Q7Z3H4 446 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 MICALL2Q8IY33 904 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 HMG20BQ9P0W2 317 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 PCDHAC2Q9Y5I4 1007 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 IFIT2P09913 472 aaKnown RBP11.16□□□□□ -0.62
PDE4D-201ENST00000309641 VEGFAP15692 232 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-201ENST00000309641 TBC1D9Q6ZT07 1266 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 TRPM4Q8TD43 1214 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 DPF2Q92785 391 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 GCC1Q96CN9 775 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 TAF1DQ9H5J8 278 aaPredicted RBP11.16□□□□□ -0.62
PDE4D-201ENST00000309641 HACL1Q9UJ83 578 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 MYH13Q9UKX3 1938 aa11.16□□□□□ -0.62
PDE4D-201ENST00000309641 AKAP11Q9UKA4 1901 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 NEFLP07196 543 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 PRDX5P30044 214 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 EPHX2P34913 555 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 HIRAP54198 1017 aaPredicted RBP11.15□□□□□ -0.62
PDE4D-201ENST00000309641 CCDC158Q5M9N0 1113 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 TTC39AQ5SRH9 613 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 RBM26Q5T8P6 1007 aaKnown RBP11.15□□□□□ -0.62
PDE4D-201ENST00000309641 AGBL3Q8NEM8 1001 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 LNPKQ9C0E8 428 aa11.15□□□□□ -0.62
PDE4D-201ENST00000309641 GNL3LQ9NVN8 582 aaKnown RBP11.15□□□□□ -0.62
PDE4D-201ENST00000309641 RPS12P25398 132 aaKnown RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 ZAP70P43403 619 aa11.14□□□□□ -0.63
PDE4D-201ENST00000309641 TBC1D10BQ4KMP7 808 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 SPATA5Q8NB90 893 aa11.14□□□□□ -0.63
PDE4D-201ENST00000309641 DENND2AQ9ULE3 1009 aa11.14□□□□□ -0.63
PDE4D-201ENST00000309641 ASTN2O75129 1339 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 USP17L8P0C7I0 530 aa11.14□□□□□ -0.63
PDE4D-201ENST00000309641 LMOD1P29536 600 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 EAPPQ56P03 285 aaPredicted RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 EDC3Q96F86 508 aaKnown RBP11.14□□□□□ -0.63
PDE4D-201ENST00000309641 AOX1Q06278 1338 aa11.14□□□□□ -0.63
PDE4D-201ENST00000309641 ADAMTSL1Q8N6G6 1762 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 SCN4AP35499 1836 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 IQCA1LA6NCM1 817 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 SEMA3EO15041 775 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 CYP2E1P05181 493 aaPredicted RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ZNF280AP59817 542 aaPredicted RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 NUCB1Q02818 461 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 WDR66Q8TBY9 1149 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ANTXR1Q9H6X2 564 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ABCF2Q9UG63 623 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 TTF2Q9UNY4 1162 aaKnown RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 SALL3Q9BXA9 1300 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 H7C1D1 291 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 UQCRFS1P1P0C7P4 283 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 FKBP1AP62942 108 aaKnown RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 SKAP1Q86WV1 359 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ZNF384Q8TF68 577 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ZNF512BQ96KM6 892 aaPredicted RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 BOLA2Q9H3K6 86 aa11.13□□□□□ -0.63
PDE4D-201ENST00000309641 ADARB2Q9NS39 739 aaKnown RBP11.13□□□□□ -0.63
PDE4D-201ENST00000309641 MYO3BQ8WXR4 1341 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 MYO5AQ9Y4I1 1855 aaKnown RBP11.12□□□□□ -0.63
PDE4D-201ENST00000309641 DIXDC1Q155Q3 683 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 NBPF9Q3BBW0 867 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 CHD1LQ86WJ1 897 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 TBC1D22AQ8WUA7 517 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 MYOZ2Q9NPC6 264 aa11.12□□□□□ -0.63
PDE4D-201ENST00000309641 PIH1D3Q9NQM4 214 aaKnown RBP11.12□□□□□ -0.63
PDE4D-201ENST00000309641 SCAF8Q9UPN6 1271 aaKnown RBP11.12□□□□□ -0.63
PDE4D-201ENST00000309641 ZBTB22O15209 634 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 KIF4BQ2VIQ3 1234 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 DLK2Q6UY11 383 aa11.11□□□□□ -0.63
PDE4D-201ENST00000309641 OGFOD1Q8N543 542 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms