RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 FGFR2P21802 821 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 ATG9AQ7Z3C6 839 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 OGFOD1Q8N543 542 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 GBA2Q9HCG7 927 aaPredicted RBP24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 JAG2Q9Y219 1238 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 PCDHAC2Q9Y5I4 1007 aa24.87■■□□□ 1.57
PDZRN3-202ENST00000308537 AOC2O75106 756 aa24.86■■□□□ 1.57
PDZRN3-202ENST00000308537 UBTFL1P0CB47 393 aaPredicted RBP24.86■■□□□ 1.57
PDZRN3-202ENST00000308537 ECE1P42892 770 aa24.86■■□□□ 1.57
PDZRN3-202ENST00000308537 LRRFIP2Q9Y608 721 aaKnown RBP24.86■■□□□ 1.57
PDZRN3-202ENST00000308537 AOX1Q06278 1338 aa24.86■■□□□ 1.57
PDZRN3-202ENST00000308537 EYA2O00167 538 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 HIBADHP31937 336 aaKnown RBP24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 HUNKP57058 714 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 IFFO2Q5TF58 517 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 MTMR14Q8NCE2 650 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 ZIC5Q96T25 663 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 PAPPA2Q9BXP8 1791 aa24.85■■□□□ 1.57
PDZRN3-202ENST00000308537 METTL24Q5JXM2 366 aa24.84■■□□□ 1.57
PDZRN3-202ENST00000308537 ZBED9Q6R2W3 1325 aa24.84■■□□□ 1.57
PDZRN3-202ENST00000308537 FAM155AB1AL88 458 aaPredicted RBP24.83■■□□□ 1.57
PDZRN3-202ENST00000308537 ATF7IPQ6VMQ6 1270 aa24.83■■□□□ 1.57
PDZRN3-202ENST00000308537 PAXIP1Q6ZW49 1069 aaPredicted RBP24.83■■□□□ 1.57
PDZRN3-202ENST00000308537 MAP2K2P36507 400 aa24.82■■□□□ 1.56
PDZRN3-202ENST00000308537 GRIK5Q16478 980 aa24.82■■□□□ 1.56
PDZRN3-202ENST00000308537 MAP2K1Q02750 393 aaPredicted RBP24.81■■□□□ 1.56
PDZRN3-202ENST00000308537 GRM1Q13255 1194 aa24.81■■□□□ 1.56
PDZRN3-202ENST00000308537 PRAMEF18Q5VWM3 479 aa24.81■■□□□ 1.56
PDZRN3-202ENST00000308537 HDAC9Q9UKV0 1011 aa24.81■■□□□ 1.56
PDZRN3-202ENST00000308537 FBXO3Q9UK99 471 aa24.8■■□□□ 1.56
PDZRN3-202ENST00000308537 MYH13Q9UKX3 1938 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 SPDYE2BA6NHP3 402 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 F8W031 263 aaPredicted RBP24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 CIAO1O76071 339 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 SPDYE6P0CI01 402 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 HSPA8P11142 646 aaKnown RBP24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 BCAMP50895 628 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 MTX1Q13505 466 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 PUM3Q15397 648 aaKnown RBP24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 MFSD14BQ5SR56 506 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 RGMBQ6NW40 437 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 C2orf69Q8N8R5 385 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 PRMT6Q96LA8 375 aaPredicted RBP24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 COPRSQ9NQ92 184 aa24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 PA2G4Q9UQ80 394 aaKnown RBP24.79■■□□□ 1.56
PDZRN3-202ENST00000308537 COL1A1P02452 1464 aaPredicted RBP24.78■■□□□ 1.56
PDZRN3-202ENST00000308537 CTCFP49711 727 aaPredicted RBP24.78■■□□□ 1.56
PDZRN3-202ENST00000308537 CFAP100Q494V2 611 aa24.78■■□□□ 1.56
PDZRN3-202ENST00000308537 MOB2Q70IA6 237 aa24.78■■□□□ 1.56
PDZRN3-202ENST00000308537 IQSEC3Q9UPP2 1182 aaPredicted RBP24.78■■□□□ 1.56
PDZRN3-202ENST00000308537 SSC5DA1L4H1 1573 aa24.77■■□□□ 1.56
PDZRN3-202ENST00000308537 IPO8O15397 1037 aaKnown RBP24.77■■□□□ 1.56
PDZRN3-202ENST00000308537 DLGAP5Q15398 846 aa24.77■■□□□ 1.56
PDZRN3-202ENST00000308537 PRDM10Q9NQV6 1147 aa24.77■■□□□ 1.56
PDZRN3-202ENST00000308537 FKBP1BP68106 108 aa24.76■■□□□ 1.55
PDZRN3-202ENST00000308537 APOBEC3FQ8IUX4 373 aaKnown RBP24.76■■□□□ 1.55
PDZRN3-202ENST00000308537 FRAT1Q92837 279 aaPredicted RBP24.76■■□□□ 1.55
PDZRN3-202ENST00000308537 CLUAP1Q96AJ1 413 aa24.76■■□□□ 1.55
PDZRN3-202ENST00000308537 SIL1Q9H173 461 aa24.76■■□□□ 1.55
PDZRN3-202ENST00000308537 GNAI3P08754 354 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 SLC10A3P09131 477 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 LBX1P52954 281 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 NOGQ13253 232 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 TMEM57Q8N5G2 664 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 LPIN2Q92539 896 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 AIDAQ96BJ3 306 aa24.75■■□□□ 1.55
PDZRN3-202ENST00000308537 TTF2Q9UNY4 1162 aaKnown RBP24.74■■□□□ 1.55
PDZRN3-202ENST00000308537 IFIT1P09914 478 aaKnown RBP24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 CAVIN4Q5BKX8 364 aa24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 ZKSCAN2Q63HK3 967 aa24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 RASAL3Q86YV0 1011 aa24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 SERPINA10Q9UK55 444 aa24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 HDAC5Q9UQL6 1122 aa24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.73■■□□□ 1.55
PDZRN3-202ENST00000308537 CLRN2A0PK11 232 aa24.72■■□□□ 1.55
PDZRN3-202ENST00000308537 RLBP1P12271 317 aa24.72■■□□□ 1.55
PDZRN3-202ENST00000308537 IL15P40933 162 aaPredicted RBP24.72■■□□□ 1.55
PDZRN3-202ENST00000308537 ZNF157P51786 506 aaPredicted RBP24.72■■□□□ 1.55
PDZRN3-202ENST00000308537 DEFB129Q9H1M3 183 aa24.72■■□□□ 1.55
PDZRN3-202ENST00000308537 VPS37DQ86XT2 251 aa24.71■■□□□ 1.55
PDZRN3-202ENST00000308537 CCDC102AQ96A19 550 aa24.71■■□□□ 1.55
PDZRN3-202ENST00000308537 UBE2Q2LH0YL09 131 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 ZBTB22O15209 634 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 SRGAP3O43295 1099 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 SLC5A1P13866 664 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 CHAF1AQ13111 956 aaPredicted RBP24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 ATP2B3Q16720 1220 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 SPDYE2Q495Y8 402 aa24.7■■□□□ 1.54
PDZRN3-202ENST00000308537 PNMA6EA0A0J9YXQ4 647 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 CRKP46108 304 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 KIF23Q02241 960 aaPredicted RBP24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 TNS4Q8IZW8 715 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 TBC1D22AQ8WUA7 517 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 CEP126Q9P2H0 1117 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 TSKSQ9UJT2 592 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 FZD1Q9UP38 647 aa24.69■■□□□ 1.54
PDZRN3-202ENST00000308537 GNAI2P04899 355 aa24.68■■□□□ 1.54
PDZRN3-202ENST00000308537 HDLBPQ00341 1268 aaKnown RBP24.68■■□□□ 1.54
PDZRN3-202ENST00000308537 LDLRAD1Q5T700 205 aa24.68■■□□□ 1.54
PDZRN3-202ENST00000308537 DZIP1LQ8IYY4 767 aaKnown RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms