RNA–Protein interactions for RNA: ENST00000308488.10

RSF1-201, Transcript of remodeling and spacing factor 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RSF1, Length 11,550 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RSF1-201ENST00000308488 MFSD4BQ5TF39 518 aa8.82□□□□□ -1
RSF1-201ENST00000308488 SMIM23A6NLE4 172 aa8.82□□□□□ -1
RSF1-201ENST00000308488 BLVRAP53004 296 aa8.82□□□□□ -1
RSF1-201ENST00000308488 KLC4Q9NSK0 619 aa8.82□□□□□ -1
RSF1-201ENST00000308488 MAP3K7CLP57077 242 aa8.82□□□□□ -1
RSF1-201ENST00000308488 FGD6Q6ZV73 1430 aa8.82□□□□□ -1
RSF1-201ENST00000308488 FYB2Q5VWT5 728 aa8.82□□□□□ -1
RSF1-201ENST00000308488 LCA5Q86VQ0 697 aa8.82□□□□□ -1
RSF1-201ENST00000308488 IFT81Q8WYA0 676 aa8.82□□□□□ -1
RSF1-201ENST00000308488 STXBP3O00186 592 aa8.82□□□□□ -1
RSF1-201ENST00000308488 TMCC1O94876 653 aa8.82□□□□□ -1
RSF1-201ENST00000308488 CLSTN2Q9H4D0 955 aa8.82□□□□□ -1
RSF1-201ENST00000308488 TMEM63CQ9P1W3 806 aa8.82□□□□□ -1
RSF1-201ENST00000308488 SCP2P22307 547 aa8.81□□□□□ -1
RSF1-201ENST00000308488 SND1Q7KZF4 910 aaKnown RBP eCLIP8.81□□□□□ -1
RSF1-201ENST00000308488 PRPF38AQ8NAV1 312 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 MRPS27Q92552 414 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 RNF40O75150 1001 aa8.81□□□□□ -1
RSF1-201ENST00000308488 GFAPP14136 432 aa8.81□□□□□ -1
RSF1-201ENST00000308488 TRPC3Q13507 836 aa8.81□□□□□ -1
RSF1-201ENST00000308488 KANK3Q6NY19 840 aa8.81□□□□□ -1
RSF1-201ENST00000308488 XAB2Q9HCS7 855 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 SEC24BO95487 1268 aa8.81□□□□□ -1
RSF1-201ENST00000308488 MMP14P50281 582 aa8.81□□□□□ -1
RSF1-201ENST00000308488 VSIG1Q86XK7 387 aa8.81□□□□□ -1
RSF1-201ENST00000308488 WDR75Q8IWA0 830 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 OSBPL1AQ9BXW6 950 aa8.81□□□□□ -1
RSF1-201ENST00000308488 DACT1Q9NYF0 836 aa8.81□□□□□ -1
RSF1-201ENST00000308488 CECR2Q9BXF3 1484 aa8.81□□□□□ -1
RSF1-201ENST00000308488 IGHDP01880 384 aa8.81□□□□□ -1
RSF1-201ENST00000308488 DYTNA2CJ06 578 aa8.81□□□□□ -1
RSF1-201ENST00000308488 APOBRQ0VD83 1088 aa8.81□□□□□ -1
RSF1-201ENST00000308488 WASF1Q92558 559 aa8.81□□□□□ -1
RSF1-201ENST00000308488 CNOT10Q9H9A5 744 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 UBAP1Q9NZ09 502 aa8.81□□□□□ -1
RSF1-201ENST00000308488 AKR1B15C9JRZ8 316 aaPredicted RBP8.81□□□□□ -1
RSF1-201ENST00000308488 LMNAP02545 664 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 MYLK4Q86YV6 388 aaPredicted RBP8.81□□□□□ -1
RSF1-201ENST00000308488 ZBTB10Q96DT7 871 aa8.81□□□□□ -1
RSF1-201ENST00000308488 BICC1Q9H694 974 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 C1orf115Q9H7X2 142 aa8.81□□□□□ -1
RSF1-201ENST00000308488 UNC45AQ9H3U1 944 aa8.81□□□□□ -1
RSF1-201ENST00000308488 DIAPH1O60610 1272 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 GNAI2P04899 355 aa8.81□□□□□ -1
RSF1-201ENST00000308488 GJB2P29033 226 aa8.81□□□□□ -1
RSF1-201ENST00000308488 TMED10P49755 219 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 BASP1P80723 227 aaKnown RBP8.81□□□□□ -1
RSF1-201ENST00000308488 TTC22Q5TAA0 569 aa8.81□□□□□ -1
RSF1-201ENST00000308488 TRIM42Q8IWZ5 723 aa8.81□□□□□ -1
RSF1-201ENST00000308488 TCP11L2Q8N4U5 519 aa8.81□□□□□ -1
RSF1-201ENST00000308488 CFAP73A6NFT4 308 aa8.8□□□□□ -1
RSF1-201ENST00000308488 INAQ16352 499 aa8.8□□□□□ -1
RSF1-201ENST00000308488 MAP7D3Q8IWC1 876 aa8.8□□□□□ -1
RSF1-201ENST00000308488 SEC31AO94979 1220 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 MFN1Q8IWA4 741 aa8.8□□□□□ -1
RSF1-201ENST00000308488 AATFQ9NY61 560 aaKnown RBP eCLIP8.8□□□□□ -14e-6■■■■■ 35.6
RSF1-201ENST00000308488 MTRF1LQ9UGC7 380 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 CHGBP05060 677 aa8.8□□□□□ -1
RSF1-201ENST00000308488 VCAM1P19320 739 aa8.8□□□□□ -1
RSF1-201ENST00000308488 CFAP157Q5JU67 520 aa8.8□□□□□ -1
RSF1-201ENST00000308488 ALS2CLQ60I27 953 aa8.8□□□□□ -1
RSF1-201ENST00000308488 GSDMBQ8TAX9 411 aa8.8□□□□□ -1
RSF1-201ENST00000308488 RNF217Q8TC41 542 aa8.8□□□□□ -1
RSF1-201ENST00000308488 MAP3K7O43318 606 aa8.8□□□□□ -1
RSF1-201ENST00000308488 AKR1B10O60218 316 aa8.8□□□□□ -1
RSF1-201ENST00000308488 TRIM14Q14142 442 aa8.8□□□□□ -1
RSF1-201ENST00000308488 TRIM22Q8IYM9 498 aa8.8□□□□□ -1
RSF1-201ENST00000308488 CCT4P50991 539 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 HOOK2Q96ED9 719 aa8.8□□□□□ -1
RSF1-201ENST00000308488 STK38LQ9Y2H1 464 aa8.8□□□□□ -1
RSF1-201ENST00000308488 USP16Q9Y5T5 823 aa8.8□□□□□ -1
RSF1-201ENST00000308488 BIN1O00499 593 aa8.8□□□□□ -1
RSF1-201ENST00000308488 N4BP3O15049 544 aa8.8□□□□□ -1
RSF1-201ENST00000308488 E2F6O75461 281 aa8.8□□□□□ -1
RSF1-201ENST00000308488 SUN1O94901 812 aa8.8□□□□□ -1
RSF1-201ENST00000308488 CC2D1AQ6P1N0 951 aaPredicted RBP8.8□□□□□ -1
RSF1-201ENST00000308488 OLFML1Q6UWY5 402 aa8.8□□□□□ -1
RSF1-201ENST00000308488 FCHSD1Q86WN1 690 aa8.8□□□□□ -1
RSF1-201ENST00000308488 USP33Q8TEY7 942 aa8.8□□□□□ -1
RSF1-201ENST00000308488 ANKRD27Q96NW4 1050 aa8.8□□□□□ -1
RSF1-201ENST00000308488 EXOC1Q9NV70 894 aa8.8□□□□□ -1
RSF1-201ENST00000308488 TUBA8Q9NY65 449 aaPredicted RBP8.8□□□□□ -1
RSF1-201ENST00000308488 CUX2O14529 1486 aa8.8□□□□□ -1
RSF1-201ENST00000308488 FERP16591 822 aa8.8□□□□□ -1
RSF1-201ENST00000308488 GYS2P54840 703 aa8.8□□□□□ -1
RSF1-201ENST00000308488 ZNF483Q8TF39 744 aaPredicted RBP8.8□□□□□ -1
RSF1-201ENST00000308488 MOV10L1Q9BXT6 1211 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 NUF2Q9BZD4 464 aa8.8□□□□□ -1
RSF1-201ENST00000308488 TMEM232C9JQI7 657 aa8.8□□□□□ -1
RSF1-201ENST00000308488 HNRNPH1P31943 449 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 RARSP54136 660 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 C8orf74Q6P047 294 aa8.8□□□□□ -1
RSF1-201ENST00000308488 SETD1BQ9UPS6 1966 aaKnown RBP8.8□□□□□ -1
RSF1-201ENST00000308488 TAOK1Q7L7X3 1001 aa8.8□□□□□ -1
RSF1-201ENST00000308488 GJA8P48165 433 aa8.79□□□□□ -1
RSF1-201ENST00000308488 LARP7Q4G0J3 582 aaKnown RBP eCLIP8.79□□□□□ -1
RSF1-201ENST00000308488 MSL3Q8N5Y2 521 aaKnown RBP8.79□□□□□ -1
RSF1-201ENST00000308488 ARHGEF2Q92974 986 aaKnown RBP8.79□□□□□ -1
RSF1-201ENST00000308488 PYM1Q9BRP8 204 aaKnown RBP8.79□□□□□ -1
RSF1-201ENST00000308488 ATP6V0A1Q93050 837 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms