RNA–Protein interactions for RNA: ENST00000308161.8

HMGCLL1-202, Transcript of 3-hydroxymethyl-3-methylglutaryl-CoA lyase like 1, humanhuman

TSL 2 BASIC

Gene HMGCLL1, Length 1,314 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLL1-202ENST00000308161 PRAMEF18Q5VWM3 479 aa21.3■■□□□ 1
HMGCLL1-202ENST00000308161 FAM84BQ96KN1 310 aaPredicted RBP21.3■■□□□ 1
HMGCLL1-202ENST00000308161 MEIS3Q99687 375 aa21.3■■□□□ 1
HMGCLL1-202ENST00000308161 SIL1Q9H173 461 aa21.3■■□□□ 1
HMGCLL1-202ENST00000308161 IQSEC3Q9UPP2 1182 aaPredicted RBP21.3■■□□□ 1
HMGCLL1-202ENST00000308161 PDE8BO95263 885 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 CTCFP49711 727 aaPredicted RBP21.29■■□□□ 1
HMGCLL1-202ENST00000308161 DLGAP5Q15398 846 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 HHIPL1Q96JK4 782 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 BEGAINQ9BUH8 593 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 TNNQ9UQP3 1299 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 EYA2O00167 538 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 IPO8O15397 1037 aaKnown RBP21.29■■□□□ 1
HMGCLL1-202ENST00000308161 FRAT2O75474 233 aaPredicted RBP21.29■■□□□ 1
HMGCLL1-202ENST00000308161 RFX5P48382 616 aaPredicted RBP21.29■■□□□ 1
HMGCLL1-202ENST00000308161 TNS4Q8IZW8 715 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 TDRD7Q8NHU6 1098 aaKnown RBP21.29■■□□□ 1
HMGCLL1-202ENST00000308161 ARHGAP45Q92619 1136 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 CLUAP1Q96AJ1 413 aa21.29■■□□□ 1
HMGCLL1-202ENST00000308161 TRIM27P14373 513 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 MMP14P50281 582 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 RBM5P52756 815 aaKnown RBP eCLIP21.28■■□□□ 1
HMGCLL1-202ENST00000308161 PTPN12Q05209 780 aaKnown RBP21.28■■□□□ 1
HMGCLL1-202ENST00000308161 CHAF1AQ13111 956 aaPredicted RBP21.28■■□□□ 1
HMGCLL1-202ENST00000308161 CAVIN4Q5BKX8 364 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 MFSD14BQ5SR56 506 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 RGMBQ6NW40 437 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 VGLL2Q8N8G2 317 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 HDAC5Q9UQL6 1122 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 PCDHAC2Q9Y5I4 1007 aa21.28■■□□□ 1
HMGCLL1-202ENST00000308161 THSD7BQ9C0I4 1608 aa21.27■■□□□ 1
HMGCLL1-202ENST00000308161 MAP2K2P36507 400 aa21.27■□□□□ 0.99
HMGCLL1-202ENST00000308161 ZNF157P51786 506 aaPredicted RBP21.27■□□□□ 0.99
HMGCLL1-202ENST00000308161 LBX1P52954 281 aa21.27■□□□□ 0.99
HMGCLL1-202ENST00000308161 TTLL12Q14166 644 aaPredicted RBP21.27■□□□□ 0.99
HMGCLL1-202ENST00000308161 CFAP100Q494V2 611 aa21.27■□□□□ 0.99
HMGCLL1-202ENST00000308161 FAM205AQ6ZU69 1335 aa21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 IFIT1P09914 478 aaKnown RBP21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 FKBP1AP62942 108 aaKnown RBP21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 PUM3Q15397 648 aaKnown RBP21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 INTS3Q68E01 1043 aaKnown RBP21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 ATF7IPQ6VMQ6 1270 aa21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 MOB2Q70IA6 237 aa21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 APOBEC3FQ8IUX4 373 aaKnown RBP21.26■□□□□ 0.99
HMGCLL1-202ENST00000308161 CLRN2A0PK11 232 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 BCAMP50895 628 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 NOGQ13253 232 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 FBXO33Q7Z6M2 555 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 ZBED3Q96IU2 234 aaPredicted RBP21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 ZIC5Q96T25 663 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 TSKSQ9UJT2 592 aa21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 TTF2Q9UNY4 1162 aaKnown RBP21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 PA2G4Q9UQ80 394 aaKnown RBP21.25■□□□□ 0.99
HMGCLL1-202ENST00000308161 MYO1BO43795 1136 aa21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 GNAI3P08754 354 aa21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 HSPA8P11142 646 aaKnown RBP21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 SLC5A1P13866 664 aa21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 NF2P35240 595 aa21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 VEZTQ9HBM0 779 aa21.24■□□□□ 0.99
HMGCLL1-202ENST00000308161 PRKG1Q13976 671 aa21.23■□□□□ 0.99
HMGCLL1-202ENST00000308161 ATG9AQ7Z3C6 839 aa21.23■□□□□ 0.99
HMGCLL1-202ENST00000308161 SPDYE2BA6NHP3 402 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 UBE2Q2LH0YL09 131 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 SPDYE6P0CI01 402 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 FGFR2P21802 821 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 ZKSCAN2Q63HK3 967 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 CCDC102AQ96A19 550 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 PRMT6Q96LA8 375 aaPredicted RBP21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 CEP126Q9P2H0 1117 aa21.22■□□□□ 0.99
HMGCLL1-202ENST00000308161 ZBED9Q6R2W3 1325 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 PAPPA2Q9BXP8 1791 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 CAPN15O75808 1086 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 FKBP1BP68106 108 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 MTMR14Q8NCE2 650 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 LPIN2Q92539 896 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 PRDM10Q9NQV6 1147 aa21.21■□□□□ 0.99
HMGCLL1-202ENST00000308161 AOX1Q06278 1338 aa21.2■□□□□ 0.99
HMGCLL1-202ENST00000308161 FAM155AB1AL88 458 aaPredicted RBP21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 SRGAP3O43295 1099 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 CIAO1O76071 339 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 GRIK5Q16478 980 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 ATP2B3Q16720 1220 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 TMEM57Q8N5G2 664 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 DEFB129Q9H1M3 183 aa21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 ZBTB4Q9P1Z0 1013 aaPredicted RBP21.2■□□□□ 0.98
HMGCLL1-202ENST00000308161 IL15P40933 162 aaPredicted RBP21.19■□□□□ 0.98
HMGCLL1-202ENST00000308161 KIF23Q02241 960 aaPredicted RBP21.19■□□□□ 0.98
HMGCLL1-202ENST00000308161 FBXO3Q9UK99 471 aa21.19■□□□□ 0.98
HMGCLL1-202ENST00000308161 GNAI2P04899 355 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 SLC10A3P09131 477 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 RASAL3Q86YV0 1011 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 FTSJ3Q8IY81 847 aaKnown RBP21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 TBC1D22AQ8WUA7 517 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 COPRSQ9NQ92 184 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 FZD1Q9UP38 647 aa21.18■□□□□ 0.98
HMGCLL1-202ENST00000308161 ARAP2Q8WZ64 1704 aa21.17■□□□□ 0.98
HMGCLL1-202ENST00000308161 CRKP46108 304 aa21.17■□□□□ 0.98
HMGCLL1-202ENST00000308161 TDRD3Q9H7E2 651 aaKnown RBP21.17■□□□□ 0.98
HMGCLL1-202ENST00000308161 SERPINA10Q9UK55 444 aa21.17■□□□□ 0.98
HMGCLL1-202ENST00000308161 ARMC9Q7Z3E5 817 aa21.16■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 78.7 ms