RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 E7EWF7 191 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 ATP2B1P20020 1258 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 AIFM3Q96NN9 605 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 IRX2Q9BZI1 471 aaPredicted RBP16.93■□□□□ 0.3
COL6A2-201ENST00000300527 LZTFL1Q9NQ48 299 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 FANCLQ9NW38 375 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 SETD1BQ9UPS6 1966 aaKnown RBP16.93■□□□□ 0.3
COL6A2-201ENST00000300527 KLF18A0A0U1RQI7 1052 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 IGKV5-2P06315 115 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 SYKP43405 635 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 COPS6Q7L5N1 327 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 CREBRFQ8IUR6 639 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 LLPHQ9BRT6 129 aaKnown RBP16.93■□□□□ 0.3
COL6A2-201ENST00000300527 VPS18Q9P253 973 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 FKBP4Q02790 459 aaKnown RBP eCLIP16.93■□□□□ 0.3
COL6A2-201ENST00000300527 CYB5RLQ6IPT4 315 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 OLFM4Q6UX06 510 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 PPP2R2CQ9Y2T4 447 aa16.93■□□□□ 0.3
COL6A2-201ENST00000300527 CARMIL3Q8ND23 1372 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 CCP110O43303 1012 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 ZRANB2O95218 330 aaKnown RBP eCLIP16.92■□□□□ 0.3
COL6A2-201ENST00000300527 CC2D1AQ6P1N0 951 aaPredicted RBP16.92■□□□□ 0.3
COL6A2-201ENST00000300527 PARD6BQ9BYG5 372 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 TBC1D8O95759 1140 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 TRMT44Q8IYL2 757 aaKnown RBP16.92■□□□□ 0.3
COL6A2-201ENST00000300527 CLIC6Q96NY7 704 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 PARP3Q9Y6F1 533 aa16.92■□□□□ 0.3
COL6A2-201ENST00000300527 ZSCAN12O43309 604 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 WWC2Q6AWC2 1192 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 TRIM65Q6PJ69 517 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 KCNG4Q8TDN1 519 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 AK7Q96M32 723 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 ALDH8A1Q9H2A2 487 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-201ENST00000300527 RNF216Q9NWF9 866 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-201ENST00000300527 C3P01024 1663 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 EFCAB8A8MWE9 144 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 FDPSP14324 419 aaKnown RBP16.91■□□□□ 0.3
COL6A2-201ENST00000300527 ATP5JP18859 108 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 NCAPHQ15003 741 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 TSGA10IPQ3SY00 556 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 PLEKHO1Q53GL0 409 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-201ENST00000300527 RTEL1Q9NZ71 1219 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 ADGRL3Q9HAR2 1447 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 CEBPAP49715 358 aaPredicted RBP16.91■□□□□ 0.3
COL6A2-201ENST00000300527 ZNF827Q17R98 1081 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 MYSM1Q5VVJ2 828 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 USPL1Q5W0Q7 1092 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 TOGARAM2Q6ZUX3 1019 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 DHX58Q96C10 678 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 RASSF4Q9H2L5 321 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 BABAM1Q9NWV8 329 aa16.91■□□□□ 0.3
COL6A2-201ENST00000300527 HMGB1P09429 215 aaKnown RBP16.9■□□□□ 0.3
COL6A2-201ENST00000300527 MYL5Q02045 173 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 OSCARQ8IYS5 282 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 BAG1Q99933 345 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-201ENST00000300527 PHLPP2Q6ZVD8 1323 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 KIF28PB7ZC32 967 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 TULP2O00295 520 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 CBFA2T2O43439 604 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 CCDC158Q5M9N0 1113 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 REXO1L1PQ8IX06 675 aa16.9■□□□□ 0.3
COL6A2-201ENST00000300527 CCDC85AQ96PX6 553 aaPredicted RBP16.9■□□□□ 0.3
COL6A2-201ENST00000300527 ITSN1Q15811 1721 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 ANO1Q5XXA6 986 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 PLEKHA4Q9H4M7 779 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 NEO1Q92859 1461 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 VWA3AA6NCI4 1184 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 RNMTO43148 476 aaKnown RBP16.89■□□□□ 0.29
COL6A2-201ENST00000300527 WDHD1O75717 1129 aaPredicted RBP16.89■□□□□ 0.29
COL6A2-201ENST00000300527 RHOXF2BP0C7M4 288 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 RHOXF2Q9BQY4 288 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 FAM208AQ9UK61 1670 aaKnown RBP16.89■□□□□ 0.29
COL6A2-201ENST00000300527 A0A087WZG4 1122 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 GCKRQ14397 625 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 CCDC102AQ96A19 550 aa16.89■□□□□ 0.29
COL6A2-201ENST00000300527 RIMBP3CA6NJZ7 1639 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 RIMBP3BA6NNM3 1639 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 RIMBP3Q9UFD9 1639 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 MON2Q7Z3U7 1717 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 NEURL1BA8MQ27 555 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 MYO1CO00159 1063 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 TFRCP02786 760 aaKnown RBP16.88■□□□□ 0.29
COL6A2-201ENST00000300527 HSPD1P10809 573 aaKnown RBP16.88■□□□□ 0.29
COL6A2-201ENST00000300527 MTF1Q14872 753 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 SUGCTQ9HAC7 445 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 PDE11AQ9HCR9 933 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 PAG1Q9NWQ8 432 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 ADAM21Q9UKJ8 722 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 MROH7-TTC4A0A0A0MT08 1334 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 FOXN1O15353 648 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 HOXB7P09629 217 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 LMBR1LQ6UX01 489 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 LEKR1Q6ZMV7 388 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 KBTBD3Q8NAB2 608 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 CNNM3Q8NE01 707 aa16.88■□□□□ 0.29
COL6A2-201ENST00000300527 SRRTQ9BXP5 876 aaKnown RBP16.88■□□□□ 0.29
COL6A2-201ENST00000300527 CWC15Q9P013 229 aaKnown RBP16.88■□□□□ 0.29
COL6A2-201ENST00000300527 H3BQF6 201 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 TPM1P09493 284 aa16.87■□□□□ 0.29
COL6A2-201ENST00000300527 LONRF2Q1L5Z9 754 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms