RNA–Protein interactions for RNA: ENST00000298966.6

SMCO4-201, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO4, Length 1,104 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-201ENST00000298966 R3HDMLQ9H3Y0 253 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 MINPP1Q9UNW1 487 aa26.39■■□□□ 1.82
SMCO4-201ENST00000298966 ANGEL1Q9UNK9 670 aaKnown RBP26.38■■□□□ 1.81
SMCO4-201ENST00000298966 LDLRAD1Q5T700 205 aa26.37■■□□□ 1.81
SMCO4-201ENST00000298966 FTSJ3Q8IY81 847 aaKnown RBP26.37■■□□□ 1.81
SMCO4-201ENST00000298966 DZIP1LQ8IYY4 767 aaKnown RBP26.37■■□□□ 1.81
SMCO4-201ENST00000298966 NOB1Q9ULX3 412 aaKnown RBP26.37■■□□□ 1.81
SMCO4-201ENST00000298966 MANSC4A6NHS7 340 aaPredicted RBP26.36■■□□□ 1.81
SMCO4-201ENST00000298966 INHBEP58166 350 aa26.36■■□□□ 1.81
SMCO4-201ENST00000298966 EXOC6Q8TAG9 804 aa26.36■■□□□ 1.81
SMCO4-201ENST00000298966 TRIM17Q9Y577 477 aa26.36■■□□□ 1.81
SMCO4-201ENST00000298966 C20orf194Q5TEA3 1177 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 INTS3Q68E01 1043 aaKnown RBP26.35■■□□□ 1.81
SMCO4-201ENST00000298966 TTLL5Q6EMB2 1281 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 TTLL11Q8NHH1 800 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 CRBNQ96SW2 442 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 CHMP4BQ9H444 224 aaKnown RBP26.35■■□□□ 1.81
SMCO4-201ENST00000298966 GREM2Q9H772 168 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 LEMD3Q9Y2U8 911 aa26.35■■□□□ 1.81
SMCO4-201ENST00000298966 TRIM27P14373 513 aa26.34■■□□□ 1.81
SMCO4-201ENST00000298966 KIAA0825Q8IV33 1275 aa26.34■■□□□ 1.81
SMCO4-201ENST00000298966 SLC10A4Q96EP9 437 aa26.34■■□□□ 1.81
SMCO4-201ENST00000298966 MAP3K2Q9Y2U5 619 aa26.34■■□□□ 1.81
SMCO4-201ENST00000298966 COL1A1P02452 1464 aaPredicted RBP26.33■■□□□ 1.81
SMCO4-201ENST00000298966 KIAA0100Q14667 2235 aaKnown RBP26.33■■□□□ 1.8
SMCO4-201ENST00000298966 HABP4Q5JVS0 413 aaKnown RBP26.32■■□□□ 1.8
SMCO4-201ENST00000298966 OTOP1Q7RTM1 612 aa26.32■■□□□ 1.8
SMCO4-201ENST00000298966 TXNRD3Q86VQ6 643 aa26.32■■□□□ 1.8
SMCO4-201ENST00000298966 IFNL1Q8IU54 200 aa26.32■■□□□ 1.8
SMCO4-201ENST00000298966 ZBTB4Q9P1Z0 1013 aaPredicted RBP26.32■■□□□ 1.8
SMCO4-201ENST00000298966 SLC4A2P04920 1241 aa26.31■■□□□ 1.8
SMCO4-201ENST00000298966 IGHMBP2P38935 993 aaKnown RBP26.31■■□□□ 1.8
SMCO4-201ENST00000298966 ZBTB48P10074 688 aaPredicted RBP26.3■■□□□ 1.8
SMCO4-201ENST00000298966 GTF2IP78347 998 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 NEXNQ0ZGT2 675 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 ZBED3Q96IU2 234 aaPredicted RBP26.3■■□□□ 1.8
SMCO4-201ENST00000298966 ANKRD2Q9GZV1 360 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 DEFB129Q9H1M3 183 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 FZD1Q9UP38 647 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 ZNF804BA4D1E1 1349 aa26.3■■□□□ 1.8
SMCO4-201ENST00000298966 POTEFA5A3E0 1075 aa26.29■■□□□ 1.8
SMCO4-201ENST00000298966 IGKV5-2P06315 115 aa26.29■■□□□ 1.8
SMCO4-201ENST00000298966 MVPQ14764 893 aaKnown RBP26.29■■□□□ 1.8
SMCO4-201ENST00000298966 KSR2Q6VAB6 950 aa26.29■■□□□ 1.8
SMCO4-201ENST00000298966 ERO1AQ96HE7 468 aa26.29■■□□□ 1.8
SMCO4-201ENST00000298966 DDX19BQ9UMR2 479 aa26.29■■□□□ 1.8
SMCO4-201ENST00000298966 PPP1R12BO60237 982 aaPredicted RBP26.28■■□□□ 1.8
SMCO4-201ENST00000298966 DLGAP5Q15398 846 aa26.28■■□□□ 1.8
SMCO4-201ENST00000298966 MAP3K11Q16584 847 aa26.28■■□□□ 1.8
SMCO4-201ENST00000298966 WNK4Q96J92 1243 aa26.28■■□□□ 1.8
SMCO4-201ENST00000298966 RBBP6Q7Z6E9 1792 aaKnown RBP26.28■■□□□ 1.8
SMCO4-201ENST00000298966 PI4KAP2A4QPH2 592 aa26.27■■□□□ 1.8
SMCO4-201ENST00000298966 PI4KAP1Q8N8J0 262 aa26.27■■□□□ 1.8
SMCO4-201ENST00000298966 PANK1Q8TE04 598 aa26.27■■□□□ 1.8
SMCO4-201ENST00000298966 ECM29Q5VYK3 1845 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 LAMB1P07942 1786 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 IGF2BP3O00425 579 aaKnown RBP eCLIP26.26■■□□□ 1.79
SMCO4-201ENST00000298966 KLRK1P26718 216 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 KCNJ4P48050 445 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 OTUD7BQ6GQQ9 843 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 PPP2R3BQ9Y5P8 575 aa26.26■■□□□ 1.79
SMCO4-201ENST00000298966 UNCXA6NJT0 531 aa26.25■■□□□ 1.79
SMCO4-201ENST00000298966 CCDC136Q96JN2 1154 aa26.25■■□□□ 1.79
SMCO4-201ENST00000298966 CLMNQ96JQ2 1002 aa26.25■■□□□ 1.79
SMCO4-201ENST00000298966 MPHOSPH8Q99549 860 aa26.25■■□□□ 1.79
SMCO4-201ENST00000298966 PTPN22Q9Y2R2 807 aa26.25■■□□□ 1.79
SMCO4-201ENST00000298966 CWF19L2Q2TBE0 894 aaKnown RBP26.24■■□□□ 1.79
SMCO4-201ENST00000298966 SUPT20HL1Q3ZLR7 823 aa26.24■■□□□ 1.79
SMCO4-201ENST00000298966 CLUAP1Q96AJ1 413 aa26.24■■□□□ 1.79
SMCO4-201ENST00000298966 COG6Q9Y2V7 657 aa26.24■■□□□ 1.79
SMCO4-201ENST00000298966 NEURL1BA8MQ27 555 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 RLBP1P12271 317 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 FLIIQ13045 1269 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 UBE3BQ7Z3V4 1068 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 MTMR14Q8NCE2 650 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 CD99L2Q8TCZ2 262 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 CD209Q9NNX6 404 aa26.23■■□□□ 1.79
SMCO4-201ENST00000298966 SSC5DA1L4H1 1573 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 H7C1W4 665 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 MYO1BO43795 1136 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 ITGA6P23229 1130 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 B4GALNT3Q6L9W6 998 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 EFCC1Q9HA90 598 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 HTTP42858 3142 aa26.22■■□□□ 1.79
SMCO4-201ENST00000298966 CRHR2Q13324 411 aa26.21■■□□□ 1.79
SMCO4-201ENST00000298966 ARMC5Q96C12 935 aa26.21■■□□□ 1.79
SMCO4-201ENST00000298966 IREB2P48200 963 aaKnown RBP26.2■■□□□ 1.78
SMCO4-201ENST00000298966 TMEM57Q8N5G2 664 aa26.2■■□□□ 1.78
SMCO4-201ENST00000298966 CLRN2A0PK11 232 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 SP3Q02447 781 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 CHRNDQ07001 517 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 ITPRIPQ8IWB1 547 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 CERS5Q8N5B7 392 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 PLA2G12BQ9BX93 195 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 VEZTQ9HBM0 779 aa26.19■■□□□ 1.78
SMCO4-201ENST00000298966 F8W031 263 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-201ENST00000298966 EN2P19622 333 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-201ENST00000298966 FKBP5Q13451 457 aaPredicted RBP26.18■■□□□ 1.78
SMCO4-201ENST00000298966 CFAP100Q494V2 611 aa26.18■■□□□ 1.78
SMCO4-201ENST00000298966 TMEM106CQ9BVX2 250 aa26.18■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms