RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 SLFNL1Q499Z3 407 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 EPHA10Q5JZY3 1008 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 PPFIBP1Q86W92 1011 aa16.58■□□□□ 0.25
TMEM47-201ENST00000275954 RNF41Q9H4P4 317 aaPredicted RBP16.58■□□□□ 0.25
TMEM47-201ENST00000275954 A0A0U1RQG5 324 aaPredicted RBP16.58■□□□□ 0.24
TMEM47-201ENST00000275954 SYKP43405 635 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 MRPS27Q92552 414 aaKnown RBP16.58■□□□□ 0.24
TMEM47-201ENST00000275954 VAT1LQ9HCJ6 419 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.58■□□□□ 0.24
TMEM47-201ENST00000275954 PREX1Q8TCU6 1659 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 TSPY2A6NKD2 308 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 ZNF772Q68DY9 489 aaPredicted RBP16.58■□□□□ 0.24
TMEM47-201ENST00000275954 AOPEPQ8N6M6 819 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 CDK5RAP3Q96JB5 506 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 SETBP1Q9Y6X0 1596 aa16.58■□□□□ 0.24
TMEM47-201ENST00000275954 ERVV-2B6SEH9 535 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 MBD4O95243 580 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 LARGE1O95461 756 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 PTGS1P23219 599 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 LMOD1P29536 600 aaPredicted RBP16.57■□□□□ 0.24
TMEM47-201ENST00000275954 PI4K2BQ8TCG2 481 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 STX8Q9UNK0 236 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 CPSF1Q10570 1443 aaKnown RBP16.57■□□□□ 0.24
TMEM47-201ENST00000275954 MAP7D2Q96T17 732 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 SH3TC1Q8TE82 1336 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 RICTORQ6R327 1708 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 SPTLC2O15270 562 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 SOGA3Q5TF21 947 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 CATIPQ7Z7H3 387 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 MARCH10Q8NA82 808 aaPredicted RBP16.57■□□□□ 0.24
TMEM47-201ENST00000275954 MTMR6Q9Y217 621 aa16.57■□□□□ 0.24
TMEM47-201ENST00000275954 NLRP5P59047 1200 aa16.56■□□□□ 0.24
TMEM47-201ENST00000275954 HLFQ16534 295 aa16.56■□□□□ 0.24
TMEM47-201ENST00000275954 LAMC1P11047 1609 aa16.56■□□□□ 0.24
TMEM47-201ENST00000275954 TNS3Q68CZ2 1445 aa16.56■□□□□ 0.24
TMEM47-201ENST00000275954 PRDM1O75626 825 aa16.56■□□□□ 0.24
TMEM47-201ENST00000275954 IGKV5-2P06315 115 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 LEO1Q8WVC0 666 aaPredicted RBP16.55■□□□□ 0.24
TMEM47-201ENST00000275954 ZSWIM6Q9HCJ5 1215 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 LIG1P18858 919 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 TCIRG1Q13488 830 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 HELLSQ9NRZ9 838 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 BCS1LQ9Y276 419 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 POLR1AO95602 1720 aaPredicted RBP16.55■□□□□ 0.24
TMEM47-201ENST00000275954 FER1L4A9Z1Z3 1794 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 RTN1Q16799 776 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 CCDC102BQ68D86 513 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 ZNF444Q8N0Y2 327 aaPredicted RBP16.55■□□□□ 0.24
TMEM47-201ENST00000275954 ARMT1Q9H993 441 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 ATG3Q9NT62 314 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 MPHOSPH10O00566 681 aaKnown RBP16.55■□□□□ 0.24
TMEM47-201ENST00000275954 AFMP43652 599 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 PI16Q6UXB8 463 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 PAXIP1Q6ZW49 1069 aaPredicted RBP16.55■□□□□ 0.24
TMEM47-201ENST00000275954 TM6SF1Q9BZW5 370 aa16.55■□□□□ 0.24
TMEM47-201ENST00000275954 FSD2A1L4K1 749 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 ADGRB1O14514 1584 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 TOP1P11387 765 aaKnown RBP16.54■□□□□ 0.24
TMEM47-201ENST00000275954 ADORA1P30542 326 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 PTF1AQ7RTS3 328 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 GOLGA6L1Q8N7Z2 621 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 PHKBQ93100 1093 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 COPRSQ9NQ92 184 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 APPBP2Q92624 585 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 MAP4K1Q92918 833 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 GPR101Q96P66 508 aaPredicted RBP16.54■□□□□ 0.24
TMEM47-201ENST00000275954 SEC31BQ9NQW1 1179 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 DACH1Q9UI36 760 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 PICALMQ13492 652 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 POLA2Q14181 598 aa16.54■□□□□ 0.24
TMEM47-201ENST00000275954 NAA16Q6N069 864 aaPredicted RBP16.54■□□□□ 0.24
TMEM47-201ENST00000275954 MAGEC2Q9UBF1 373 aaPredicted RBP16.54■□□□□ 0.24
TMEM47-201ENST00000275954 E7EWF7 191 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 CBFA2T2O43439 604 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 RRP9O43818 475 aaKnown RBP16.53■□□□□ 0.24
TMEM47-201ENST00000275954 TTC6Q86TZ1 520 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 KCNG4Q8TDN1 519 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 ZC3H12CQ9C0D7 883 aaKnown RBP16.53■□□□□ 0.24
TMEM47-201ENST00000275954 PRDM10Q9NQV6 1147 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 CEP131Q9UPN4 1083 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 GJA3Q9Y6H8 435 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 MTERF4Q7Z6M4 381 aaKnown RBP16.53■□□□□ 0.24
TMEM47-201ENST00000275954 PDCL2Q8N4E4 241 aa16.53■□□□□ 0.24
TMEM47-201ENST00000275954 ARGLU1Q9NWB6 273 aaPredicted RBP16.53■□□□□ 0.24
TMEM47-201ENST00000275954 CYP21A2P08686 494 aa16.52■□□□□ 0.24
TMEM47-201ENST00000275954 PTPN12Q05209 780 aaKnown RBP16.52■□□□□ 0.24
TMEM47-201ENST00000275954 OFD1O75665 1012 aa16.52■□□□□ 0.24
TMEM47-201ENST00000275954 POLD1P28340 1107 aa16.52■□□□□ 0.24
TMEM47-201ENST00000275954 IQGAP1P46940 1657 aa16.52■□□□□ 0.23
TMEM47-201ENST00000275954 URI1O94763 535 aaPredicted RBP16.52■□□□□ 0.23
TMEM47-201ENST00000275954 KRT18P05783 430 aaKnown RBP16.52■□□□□ 0.23
TMEM47-201ENST00000275954 SKILP12757 684 aa16.52■□□□□ 0.23
TMEM47-201ENST00000275954 CBX1P83916 185 aa16.52■□□□□ 0.23
TMEM47-201ENST00000275954 SPECC1Q5M775 1068 aa16.52■□□□□ 0.23
TMEM47-201ENST00000275954 CTDP1Q9Y5B0 961 aaPredicted RBP16.52■□□□□ 0.23
TMEM47-201ENST00000275954 HSPD1P10809 573 aaKnown RBP16.51■□□□□ 0.23
TMEM47-201ENST00000275954 ESR2Q92731 530 aa16.51■□□□□ 0.23
TMEM47-201ENST00000275954 JCADQ9P266 1359 aa16.51■□□□□ 0.23
TMEM47-201ENST00000275954 hCG_1642624A0A1W2PR95 340 aa16.51■□□□□ 0.23
TMEM47-201ENST00000275954 CUL4AQ13619 759 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms