RNA–Protein interactions for RNA: ENST00000269397.8

CBX4-201, Transcript of chromobox 4, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CBX4, Length 2,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX4-201ENST00000269397 OSBPL5Q9H0X9 879 aaPredicted RBP31.99■■■□□ 2.71
CBX4-201ENST00000269397 FOXO4P98177 505 aa31.98■■■□□ 2.71
CBX4-201ENST00000269397 IFIT1P09914 478 aaKnown RBP31.98■■■□□ 2.71
CBX4-201ENST00000269397 SLFN14P0C7P3 912 aa31.98■■■□□ 2.71
CBX4-201ENST00000269397 PPP1R13BQ96KQ4 1090 aa31.98■■■□□ 2.71
CBX4-201ENST00000269397 HSP90AB3PQ58FF7 597 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 C8orf76Q96K31 380 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 ST7Q9NRC1 585 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 KRT222Q8N1A0 295 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 OSBP2Q969R2 916 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 NEDD4P46934 1319 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 RGPD5Q99666 1765 aa31.97■■■□□ 2.71
CBX4-201ENST00000269397 FKBP4Q02790 459 aaKnown RBP eCLIP31.96■■■□□ 2.713e-6■■■□□ 17
CBX4-201ENST00000269397 ERCC6LQ2NKX8 1250 aa31.96■■■□□ 2.71
CBX4-201ENST00000269397 RNF113AO15541 343 aaKnown RBP31.96■■■□□ 2.71
CBX4-201ENST00000269397 GABPB1Q06547 395 aaPredicted RBP31.96■■■□□ 2.71
CBX4-201ENST00000269397 SPTLC2O15270 562 aa31.95■■■□□ 2.71
CBX4-201ENST00000269397 LMOD1P29536 600 aaPredicted RBP31.95■■■□□ 2.71
CBX4-201ENST00000269397 SLC3A2P08195 630 aaKnown RBP31.95■■■□□ 2.71
CBX4-201ENST00000269397 SFPQP23246 707 aaKnown RBP eCLIP31.95■■■□□ 2.71
CBX4-201ENST00000269397 A0A1W2PQ27 194 aa31.94■■■□□ 2.7
CBX4-201ENST00000269397 A0A1W2PQ64 194 aa31.94■■■□□ 2.7
CBX4-201ENST00000269397 A0A1W2PQD8 194 aa31.94■■■□□ 2.7
CBX4-201ENST00000269397 ZNF202O95125 648 aa31.94■■■□□ 2.7
CBX4-201ENST00000269397 ORC3Q9UBD5 711 aaPredicted RBP31.94■■■□□ 2.7
CBX4-201ENST00000269397 KIF28PB7ZC32 967 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 TATP17735 454 aaPredicted RBP31.93■■■□□ 2.7
CBX4-201ENST00000269397 ZNF446Q9NWS9 450 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 IMPACTQ9P2X3 320 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 KLF18A0A0U1RQI7 1052 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 PUS3Q9BZE2 481 aaKnown RBP31.93■■■□□ 2.7
CBX4-201ENST00000269397 A0A1B0GUL7 405 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 GOLGA8BA8MQT2 603 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 ATP1A3P13637 1013 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 MARCKSP29966 332 aaPredicted RBP31.93■■■□□ 2.7
CBX4-201ENST00000269397 PTPN21Q16825 1174 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 GORABQ5T7V8 394 aa31.93■■■□□ 2.7
CBX4-201ENST00000269397 WASHC4Q2M389 1173 aa31.92■■■□□ 2.7
CBX4-201ENST00000269397 MYSM1Q5VVJ2 828 aa31.92■■■□□ 2.7
CBX4-201ENST00000269397 PLBD2Q8NHP8 589 aa31.92■■■□□ 2.7
CBX4-201ENST00000269397 KRT28Q7Z3Y7 464 aa31.92■■■□□ 2.7
CBX4-201ENST00000269397 KCNG4Q8TDN1 519 aa31.92■■■□□ 2.7
CBX4-201ENST00000269397 NCAPHQ15003 741 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 FBXO18Q8NFZ0 1043 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 ABCC6O95255 1503 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 TERF2Q15554 542 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 TTLL7Q6ZT98 887 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 KCND1Q9NSA2 647 aa31.91■■■□□ 2.7
CBX4-201ENST00000269397 IFNL2Q8IZJ0 200 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 PRC1O43663 620 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 SYNE3Q6ZMZ3 975 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 CCDC150Q8NCX0 1101 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 SLIT3O75094 1523 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 FER1L4A9Z1Z3 1794 aa31.9■■■□□ 2.7
CBX4-201ENST00000269397 ADAMTS7Q9UKP4 1686 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 FOXP2O15409 715 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 PFKFB1P16118 471 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 ANKLE2Q86XL3 938 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 HOMER1Q86YM7 354 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 POLR3EQ9NVU0 708 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 HPS5Q9UPZ3 1129 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 CYP27B1O15528 508 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 NLRP12P59046 1061 aa31.89■■■□□ 2.7
CBX4-201ENST00000269397 H7C1W4 665 aa31.88■■■□□ 2.69
CBX4-201ENST00000269397 KIF2AO00139 706 aaPredicted RBP31.88■■■□□ 2.69
CBX4-201ENST00000269397 CPLX1O14810 134 aa31.88■■■□□ 2.69
CBX4-201ENST00000269397 CSB-PGBD3P0DP91 1061 aa31.88■■■□□ 2.69
CBX4-201ENST00000269397 MROH7-TTC4A0A0A0MT08 1334 aa31.88■■■□□ 2.69
CBX4-201ENST00000269397 IL15P40933 162 aaPredicted RBP31.88■■■□□ 2.69
CBX4-201ENST00000269397 AIFM3Q96NN9 605 aa31.88■■■□□ 2.69
CBX4-201ENST00000269397 NBPF26B4DH59 902 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 WDHD1O75717 1129 aaPredicted RBP31.87■■■□□ 2.69
CBX4-201ENST00000269397 YEATS4O95619 227 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 GOLGA8FQ08AF8 430 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 GOLGA8DPQ0D2H9 430 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 NBPF14Q5TI25 921 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 NBPF10Q6P3W6 841 aaKnown RBP31.87■■■□□ 2.69
CBX4-201ENST00000269397 NBPF15Q8N660 670 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 SCN11AQ9UI33 1791 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 ARFGEF2Q9Y6D5 1785 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 MEGF6O75095 1541 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 FGAP02671 866 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 FANCCQ00597 558 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 BPIFA3Q9BQP9 254 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 L2HGDHQ9H9P8 463 aa31.87■■■□□ 2.69
CBX4-201ENST00000269397 EYA2O00167 538 aa31.86■■■□□ 2.69
CBX4-201ENST00000269397 AXDND1Q5T1B0 1012 aaPredicted RBP31.86■■■□□ 2.69
CBX4-201ENST00000269397 ANO1Q5XXA6 986 aa31.86■■■□□ 2.69
CBX4-201ENST00000269397 CCDC85AQ96PX6 553 aaPredicted RBP31.86■■■□□ 2.69
CBX4-201ENST00000269397 ZBTB3Q9H5J0 574 aa31.86■■■□□ 2.69
CBX4-201ENST00000269397 ADORA1P30542 326 aa31.85■■■□□ 2.69
CBX4-201ENST00000269397 DPF2Q92785 391 aa31.85■■■□□ 2.69
CBX4-201ENST00000269397 CABP4P57796 275 aa31.85■■■□□ 2.69
CBX4-201ENST00000269397 TPM4P67936 248 aa31.85■■■□□ 2.69
CBX4-201ENST00000269397 IMMTQ16891 758 aaKnown RBP31.85■■■□□ 2.69
CBX4-201ENST00000269397 DENND2AQ9ULE3 1009 aa31.85■■■□□ 2.69
CBX4-201ENST00000269397 EVCP57679 992 aa31.84■■■□□ 2.69
CBX4-201ENST00000269397 ANTXR2P58335 489 aa31.84■■■□□ 2.69
CBX4-201ENST00000269397 CWC25Q9NXE8 425 aaPredicted RBP31.84■■■□□ 2.69
CBX4-201ENST00000269397 DNAI1Q9UI46 699 aa31.84■■■□□ 2.69
Retrieved 100 of 20,778 RNA–protein pairs in 179.4 ms