RNA–Protein interactions for RNA: ENST00000269080.6

ABCA8-201, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 1 (best) BASIC

Gene ABCA8, Length 5,677 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-201ENST00000269080 PLCB3Q01970 1234 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 TMED1Q13445 227 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 KRT32Q14532 448 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 RASIP1Q5U651 963 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 ZNF444Q8N0Y2 327 aaPredicted RBP11.81□□□□□ -0.52
ABCA8-201ENST00000269080 MYD88Q99836 296 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 SYNCQ9H7C4 482 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 RAB3GAP1Q15042 981 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 UAP1Q16222 522 aaPredicted RBP11.81□□□□□ -0.52
ABCA8-201ENST00000269080 MYRIPQ8NFW9 859 aa11.81□□□□□ -0.52
ABCA8-201ENST00000269080 GIGYF1O75420 1035 aaPredicted RBP11.8□□□□□ -0.52
ABCA8-201ENST00000269080 LRRC23Q53EV4 343 aaPredicted RBP11.8□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC62Q6P9F0 684 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 SMARCC2Q8TAQ2 1214 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 FAM169AQ9Y6X4 670 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 VAV2P52735 878 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 PPARDQ03181 441 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 PPP2R5AQ15172 486 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 ASXL2Q76L83 1435 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 BAG3O95817 575 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 IDEP14735 1019 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 UBE2HP62256 183 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 IRX5P78411 483 aaPredicted RBP11.8□□□□□ -0.52
ABCA8-201ENST00000269080 SF3A3Q12874 501 aaKnown RBP eCLIP11.8□□□□□ -0.52
ABCA8-201ENST00000269080 OGFOD1Q8N543 542 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 ANKFY1Q9P2R3 1169 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 ARHGAP25P42331 645 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 SKOR1P84550 965 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 JDP2Q8WYK2 163 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 SNX21Q969T3 373 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 TFCP2L1Q9NZI6 479 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 RLBP1P12271 317 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 DUSP27Q5VZP5 1158 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC186Q7Z3E2 898 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 CTCFLQ8NI51 663 aaPredicted RBP11.8□□□□□ -0.52
ABCA8-201ENST00000269080 SETDB2Q96T68 719 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 C19orf44Q9H6X5 657 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 STK38LQ9Y2H1 464 aa11.8□□□□□ -0.52
ABCA8-201ENST00000269080 GSTO1P78417 241 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 CALCOCO2Q13137 446 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 ARHGAP24Q8N264 748 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 ZCRB1Q8TBF4 217 aaKnown RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 C8orf76Q96K31 380 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 TRPC3Q13507 836 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 SLMAPQ14BN4 828 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 TMEM266Q2M3C6 531 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 CDCA7Q9BWT1 371 aaPredicted RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 PHAXQ9H814 394 aaKnown RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 MTRF1LQ9UGC7 380 aaKnown RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 WDR46O15213 610 aaKnown RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 CLUL1Q15846 466 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 TBC1D9Q6ZT07 1266 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 TTC21AQ8NDW8 1320 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 DNAJC8O75937 253 aaPredicted RBP11.79□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC14Q49A88 953 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 HSP90AA4PQ58FG1 418 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 BEGAINQ9BUH8 593 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 NYXQ9GZU5 481 aa11.79□□□□□ -0.52
ABCA8-201ENST00000269080 EEF2P13639 858 aaKnown RBP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 UBASH3AP57075 661 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 USHBP1Q8N6Y0 703 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 ZBTB41Q5SVQ8 909 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 GIMAP6Q6P9H5 292 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 ATP2A3Q93084 1043 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 RAB34Q9BZG1 259 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 RIPOR2Q9Y4F9 1068 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 UHRF1BP1Q6BDS2 1440 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 PHEXP78562 749 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 GRM1Q13255 1194 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 HVCN1Q96D96 273 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 SPINK5Q9NQ38 1064 aaPredicted RBP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 BMP2KLQ5H9B9 411 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 TRMT1LQ7Z2T5 733 aaKnown RBP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 TBC1D5Q92609 795 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 DBF4Q9UBU7 674 aaPredicted RBP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 PPME1Q9Y570 386 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.78□□□□□ -0.52
ABCA8-201ENST00000269080 NCOA1Q15788 1441 aa11.78□□□□□ -0.52
ABCA8-201ENST00000269080 PRPHP41219 470 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 PPP1R7Q15435 360 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC89Q8N998 374 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 USP6NLQ92738 828 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 MRRFQ96E11 262 aaKnown RBP11.77□□□□□ -0.52
ABCA8-201ENST00000269080 CABS1Q96KC9 395 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 TRIM47Q96LD4 638 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 DDX21Q9NR30 783 aaKnown RBP eCLIP11.77□□□□□ -0.52
ABCA8-201ENST00000269080 TIAM1Q13009 1591 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC152Q4G0S7 254 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 CCDC65Q8IXS2 484 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 STAG1Q8WVM7 1258 aa11.77□□□□□ -0.52
ABCA8-201ENST00000269080 RAP1GDS1P52306 607 aa11.77□□□□□ -0.53
ABCA8-201ENST00000269080 KARSQ15046 597 aaKnown RBP11.77□□□□□ -0.53
ABCA8-201ENST00000269080 NME9Q86XW9 330 aa11.77□□□□□ -0.53
ABCA8-201ENST00000269080 SMC5Q8IY18 1101 aa11.77□□□□□ -0.53
ABCA8-201ENST00000269080 NAIPQ13075 1403 aa11.77□□□□□ -0.53
ABCA8-201ENST00000269080 PDCD2Q16342 344 aaPredicted RBP11.77□□□□□ -0.53
ABCA8-201ENST00000269080 USP37Q86T82 979 aa11.77□□□□□ -0.53
ABCA8-201ENST00000269080 RNF41Q9H4P4 317 aaPredicted RBP11.77□□□□□ -0.53
ABCA8-201ENST00000269080 CCDC196A0A1B0GTZ2 297 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms