RNA–Protein interactions for RNA: ENST00000261963.11

MCF2L-201, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 1 (best)

Gene MCF2L, Length 2,419 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-201ENST00000261963 TTLL11Q8NHH1 800 aa26.46■■□□□ 1.83
MCF2L-201ENST00000261963 NCOA5Q9HCD5 579 aaKnown RBP26.46■■□□□ 1.83
MCF2L-201ENST00000261963 ITGB4P16144 1822 aa26.46■■□□□ 1.83
MCF2L-201ENST00000261963 BCL9O00512 1426 aa26.46■■□□□ 1.83
MCF2L-201ENST00000261963 PDIA3P30101 505 aaKnown RBP26.46■■□□□ 1.83
MCF2L-201ENST00000261963 GREM2Q9H772 168 aa26.46■■□□□ 1.83
MCF2L-201ENST00000261963 GOLGA6L4A6NEF3 574 aa26.45■■□□□ 1.83
MCF2L-201ENST00000261963 ADD1P35611 737 aaKnown RBP26.45■■□□□ 1.83
MCF2L-201ENST00000261963 NCBP1Q09161 790 aaKnown RBP26.45■■□□□ 1.83
MCF2L-201ENST00000261963 WASHC4Q2M389 1173 aa26.45■■□□□ 1.83
MCF2L-201ENST00000261963 LRRFIP1Q32MZ4 808 aaKnown RBP26.45■■□□□ 1.83
MCF2L-201ENST00000261963 NAA16Q6N069 864 aaPredicted RBP26.45■■□□□ 1.83
MCF2L-201ENST00000261963 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.45■■□□□ 1.82
MCF2L-201ENST00000261963 ITGA6P23229 1130 aa26.45■■□□□ 1.82
MCF2L-201ENST00000261963 GABPB1Q06547 395 aaPredicted RBP26.45■■□□□ 1.82
MCF2L-201ENST00000261963 ZNF274Q96GC6 653 aaPredicted RBP26.44■■□□□ 1.82
MCF2L-201ENST00000261963 PUS7LQ9H0K6 701 aaKnown RBP26.44■■□□□ 1.82
MCF2L-201ENST00000261963 ABCC12Q96J65 1359 aa26.44■■□□□ 1.82
MCF2L-201ENST00000261963 RBM43Q6ZSC3 357 aaKnown RBP26.44■■□□□ 1.82
MCF2L-201ENST00000261963 FBXL16Q8N461 479 aa26.44■■□□□ 1.82
MCF2L-201ENST00000261963 DDX19AQ9NUU7 478 aaKnown RBP26.44■■□□□ 1.82
MCF2L-201ENST00000261963 ZBTB1Q9Y2K1 713 aa26.44■■□□□ 1.82
MCF2L-201ENST00000261963 MRVI1Q9Y6F6 885 aa26.44■■□□□ 1.82
MCF2L-201ENST00000261963 LRP6O75581 1613 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 TYRO3Q06418 890 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 HSP90AB3PQ58FF7 597 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 METTL24Q5JXM2 366 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 APPBP2Q92624 585 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 CLSTN2Q9H4D0 955 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 NWD2Q9ULI1 1742 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 NR1I2O75469 434 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 GTF2E1P29083 439 aaPredicted RBP26.43■■□□□ 1.82
MCF2L-201ENST00000261963 CTSWP56202 376 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 TNMDQ9H2S6 317 aa26.43■■□□□ 1.82
MCF2L-201ENST00000261963 GPHNQ9NQX3 736 aaPredicted RBP26.43■■□□□ 1.82
MCF2L-201ENST00000261963 FGAP02671 866 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 FOSBP53539 338 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 HAND2P61296 217 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 LDHAL6AQ6ZMR3 332 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 CKAP2LQ8IYA6 745 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 CTNNA3Q9UI47 895 aa26.42■■□□□ 1.82
MCF2L-201ENST00000261963 MCAMP43121 646 aa26.41■■□□□ 1.82
MCF2L-201ENST00000261963 EVCP57679 992 aa26.41■■□□□ 1.82
MCF2L-201ENST00000261963 VGLL2Q8N8G2 317 aa26.41■■□□□ 1.82
MCF2L-201ENST00000261963 FAM200AQ8TCP9 573 aa26.41■■□□□ 1.82
MCF2L-201ENST00000261963 CFAP45Q9UL16 551 aa26.41■■□□□ 1.82
MCF2L-201ENST00000261963 PPFIA3O75145 1194 aa26.4■■□□□ 1.82
MCF2L-201ENST00000261963 CGNQ9P2M7 1197 aaKnown RBP26.4■■□□□ 1.82
MCF2L-201ENST00000261963 NAP1L2Q9ULW6 460 aaPredicted RBP26.4■■□□□ 1.82
MCF2L-201ENST00000261963 SMTNL1A8MU46 457 aa26.4■■□□□ 1.82
MCF2L-201ENST00000261963 IRS4O14654 1257 aaPredicted RBP26.4■■□□□ 1.82
MCF2L-201ENST00000261963 IMMTQ16891 758 aaKnown RBP26.4■■□□□ 1.82
MCF2L-201ENST00000261963 BICD2Q8TD16 824 aa26.4■■□□□ 1.82
MCF2L-201ENST00000261963 ANKRD18BA2A2Z9 1011 aa26.39■■□□□ 1.81
MCF2L-201ENST00000261963 FTOQ9C0B1 505 aaKnown RBP eCLIP26.39■■□□□ 1.81
MCF2L-201ENST00000261963 FDPSP14324 419 aaKnown RBP26.38■■□□□ 1.81
MCF2L-201ENST00000261963 PTGS1P23219 599 aa26.38■■□□□ 1.81
MCF2L-201ENST00000261963 MB21D2Q8IYB1 491 aaPredicted RBP26.38■■□□□ 1.81
MCF2L-201ENST00000261963 GPAA1O43292 621 aa26.38■■□□□ 1.81
MCF2L-201ENST00000261963 CNNM1Q9NRU3 951 aa26.38■■□□□ 1.81
MCF2L-201ENST00000261963 TRMT112Q9UI30 125 aaKnown RBP26.38■■□□□ 1.81
MCF2L-201ENST00000261963 CEBPZQ03701 1054 aaKnown RBP26.37■■□□□ 1.81
MCF2L-201ENST00000261963 DDX41Q9UJV9 622 aaKnown RBP26.37■■□□□ 1.81
MCF2L-201ENST00000261963 RCOR1Q9UKL0 485 aa26.37■■□□□ 1.81
MCF2L-201ENST00000261963 ILDR1Q86SU0 546 aaPredicted RBP26.37■■□□□ 1.81
MCF2L-201ENST00000261963 ZNF512BQ96KM6 892 aaPredicted RBP26.37■■□□□ 1.81
MCF2L-201ENST00000261963 TMEM51Q9NW97 253 aa26.37■■□□□ 1.81
MCF2L-201ENST00000261963 CARMIL3Q8ND23 1372 aa26.37■■□□□ 1.81
MCF2L-201ENST00000261963 AKAP11Q9UKA4 1901 aa26.37■■□□□ 1.81
MCF2L-201ENST00000261963 ANTXR2P58335 489 aa26.36■■□□□ 1.81
MCF2L-201ENST00000261963 UBN2Q6ZU65 1347 aa26.36■■□□□ 1.81
MCF2L-201ENST00000261963 USP28Q96RU2 1077 aa26.36■■□□□ 1.81
MCF2L-201ENST00000261963 PRC1O43663 620 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 ADD2P35612 726 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 GUCY1B3Q02153 619 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 ANO6Q4KMQ2 910 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 TBC1D2BQ9UPU7 963 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 LUZP1Q86V48 1076 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 SYTL4Q96C24 671 aaPredicted RBP26.35■■□□□ 1.81
MCF2L-201ENST00000261963 ANKRD36CQ5JPF3 1778 aa26.35■■□□□ 1.81
MCF2L-201ENST00000261963 ERVV-1B6SEH8 477 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 PDE8AO60658 829 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 C16orf45Q96MC5 204 aaPredicted RBP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 CBX8Q9HC52 389 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 PIH1D3Q9NQM4 214 aaKnown RBP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 HPS5Q9UPZ3 1129 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 PAXBP1Q9Y5B6 917 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 COL14A1Q05707 1796 aaKnown RBP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 PDE8BO95263 885 aa26.34■■□□□ 1.81
MCF2L-201ENST00000261963 DZIP3Q86Y13 1208 aaKnown RBP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 DDX24Q9GZR7 859 aaKnown RBP eCLIP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 MORC2Q9Y6X9 1032 aaPredicted RBP26.34■■□□□ 1.81
MCF2L-201ENST00000261963 EXOC5O00471 708 aa26.33■■□□□ 1.81
MCF2L-201ENST00000261963 SLFN14P0C7P3 912 aa26.33■■□□□ 1.81
MCF2L-201ENST00000261963 IL6STP40189 918 aaPredicted RBP26.33■■□□□ 1.81
MCF2L-201ENST00000261963 NBPF3Q9H094 633 aa26.33■■□□□ 1.81
MCF2L-201ENST00000261963 MYH15Q9Y2K3 1946 aa26.33■■□□□ 1.81
MCF2L-201ENST00000261963 KAT6BQ8WYB5 2073 aa26.33■■□□□ 1.81
MCF2L-201ENST00000261963 ZNF34Q8IZ26 560 aa26.33■■□□□ 1.8
MCF2L-201ENST00000261963 CHMP4CQ96CF2 233 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms