RNA–Protein interactions for RNA: ENST00000233330.6

RTKN-201, Transcript of rhotekin, humanhuman

TSL 1 (best) BASIC

Gene RTKN, Length 2,220 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTKN-201ENST00000233330 CHST3Q7LGC8 479 aa23.27■■□□□ 1.31
RTKN-201ENST00000233330 ELP1O95163 1332 aa23.26■■□□□ 1.31
RTKN-201ENST00000233330 SLC5A1P13866 664 aa23.26■■□□□ 1.31
RTKN-201ENST00000233330 TTC6Q86TZ1 520 aa23.26■■□□□ 1.31
RTKN-201ENST00000233330 BCL9LQ86UU0 1499 aa23.26■■□□□ 1.31
RTKN-201ENST00000233330 IDH1O75874 414 aaKnown RBP23.25■■□□□ 1.31
RTKN-201ENST00000233330 CTDNEP1O95476 244 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 DDX11Q96FC9 970 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 ZNF274Q96GC6 653 aaPredicted RBP23.25■■□□□ 1.31
RTKN-201ENST00000233330 MYH15Q9Y2K3 1946 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 CASZ1Q86V15 1759 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 TPRNQ4KMQ1 711 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 ZNF652Q9Y2D9 606 aa23.25■■□□□ 1.31
RTKN-201ENST00000233330 PDIA3P30101 505 aaKnown RBP23.24■■□□□ 1.31
RTKN-201ENST00000233330 EVCP57679 992 aa23.24■■□□□ 1.31
RTKN-201ENST00000233330 FAM184AQ8NB25 1140 aa23.24■■□□□ 1.31
RTKN-201ENST00000233330 LETM1O95202 739 aaPredicted RBP23.24■■□□□ 1.31
RTKN-201ENST00000233330 VPS72Q15906 364 aa23.24■■□□□ 1.31
RTKN-201ENST00000233330 MB21D2Q8IYB1 491 aaPredicted RBP23.24■■□□□ 1.31
RTKN-201ENST00000233330 LINC00116Q8NCU8 138 aa23.24■■□□□ 1.31
RTKN-201ENST00000233330 ZNF532Q9HCE3 1301 aa23.24■■□□□ 1.31
RTKN-201ENST00000233330 PDE6AP16499 860 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 CCT2P78371 535 aaKnown RBP23.23■■□□□ 1.31
RTKN-201ENST00000233330 HMGN5P82970 282 aaKnown RBP23.23■■□□□ 1.31
RTKN-201ENST00000233330 SALL1Q9NSC2 1324 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 TCRBV5S4A2TA0A5A2 114 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 PTPDC1A2A3K4 754 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 SNAP23O00161 211 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 ZNF213O14771 459 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 IGHMBP2P38935 993 aaKnown RBP23.23■■□□□ 1.31
RTKN-201ENST00000233330 RESTQ13127 1097 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 CLEC4GQ6UXB4 293 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 SPATA5Q8NB90 893 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 PDLIM2Q96JY6 352 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 SCAND2PQ9GZW5 306 aaPredicted RBP23.23■■□□□ 1.31
RTKN-201ENST00000233330 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
RTKN-201ENST00000233330 H3BQV1 296 aa23.22■■□□□ 1.31
RTKN-201ENST00000233330 IFFO2Q5TF58 517 aa23.22■■□□□ 1.31
RTKN-201ENST00000233330 RNF214Q8ND24 703 aa23.22■■□□□ 1.31
RTKN-201ENST00000233330 C8orf37Q96NL8 207 aa23.22■■□□□ 1.31
RTKN-201ENST00000233330 COL4A1P02462 1669 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 MCM5P33992 734 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 RASGRF1Q13972 1273 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 NCOA7Q8NI08 942 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 NCOA5Q9HCD5 579 aaKnown RBP23.21■■□□□ 1.31
RTKN-201ENST00000233330 A0A1B0GUL6 1792 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 SCN7AQ01118 1682 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 NGLY1Q96IV0 654 aa23.21■■□□□ 1.31
RTKN-201ENST00000233330 ESPNB1AK53 854 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 PRC1O43663 620 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 ZSCAN16Q9H4T2 348 aaPredicted RBP23.2■■□□□ 1.3
RTKN-201ENST00000233330 GPHNQ9NQX3 736 aaPredicted RBP23.2■■□□□ 1.3
RTKN-201ENST00000233330 NAP1L2Q9ULW6 460 aaPredicted RBP23.2■■□□□ 1.3
RTKN-201ENST00000233330 KLHL34Q8N239 644 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 CHMP4CQ96CF2 233 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 NBPF3Q9H094 633 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 KIF3AQ9Y496 699 aa23.2■■□□□ 1.3
RTKN-201ENST00000233330 WDR19Q8NEZ3 1342 aa23.19■■□□□ 1.3
RTKN-201ENST00000233330 ANTXR2P58335 489 aa23.19■■□□□ 1.3
RTKN-201ENST00000233330 NAA16Q6N069 864 aaPredicted RBP23.19■■□□□ 1.3
RTKN-201ENST00000233330 RALYLQ86SE5 291 aaKnown RBP23.19■■□□□ 1.3
RTKN-201ENST00000233330 SPATA32Q96LK8 384 aa23.19■■□□□ 1.3
RTKN-201ENST00000233330 TFIP11Q9UBB9 837 aaKnown RBP23.19■■□□□ 1.3
RTKN-201ENST00000233330 LEO1Q8WVC0 666 aaPredicted RBP23.18■■□□□ 1.3
RTKN-201ENST00000233330 CNTNAP4Q9C0A0 1308 aa23.18■■□□□ 1.3
RTKN-201ENST00000233330 CHRNDQ07001 517 aa23.18■■□□□ 1.3
RTKN-201ENST00000233330 BTAF1O14981 1849 aa23.18■■□□□ 1.3
RTKN-201ENST00000233330 STRBPQ96SI9 672 aaKnown RBP23.17■■□□□ 1.3
RTKN-201ENST00000233330 TAF1P21675 1872 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 CLCN1P35523 988 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 KCNQ4P56696 695 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 MAP3K12Q12852 859 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 AIDAQ96BJ3 306 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 CHD4Q14839 1912 aa23.17■■□□□ 1.3
RTKN-201ENST00000233330 ERFEQ4G0M1 354 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
RTKN-201ENST00000233330 CARMIL3Q8ND23 1372 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 UBAP1LF5GYI3 381 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 APPP05067 770 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 BCAMP50895 628 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 TBC1D10CQ8IV04 446 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 MAGEB6Q8N7X4 407 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 FUCA2Q9BTY2 467 aa23.16■■□□□ 1.3
RTKN-201ENST00000233330 KLF18A0A0U1RQI7 1052 aa23.15■■□□□ 1.3
RTKN-201ENST00000233330 PTF1AQ7RTS3 328 aa23.15■■□□□ 1.3
RTKN-201ENST00000233330 FNBP4Q8N3X1 1017 aaPredicted RBP23.15■■□□□ 1.3
RTKN-201ENST00000233330 RGL2O15211 777 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 TRDNQ13061 729 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 GIMAP6Q6P9H5 292 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 HPS5Q9UPZ3 1129 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 ZMYM6O95789 1325 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 C4AP0C0L4 1744 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 C4BP0C0L5 1744 aa23.14■■□□□ 1.3
RTKN-201ENST00000233330 NHSQ6T4R5 1651 aa23.14■■□□□ 1.29
RTKN-201ENST00000233330 THSD7AQ9UPZ6 1657 aa23.14■■□□□ 1.29
RTKN-201ENST00000233330 FDPSP14324 419 aaKnown RBP23.14■■□□□ 1.29
RTKN-201ENST00000233330 LIG1P18858 919 aa23.14■■□□□ 1.29
RTKN-201ENST00000233330 SF3B3Q15393 1217 aaKnown RBP23.14■■□□□ 1.29
RTKN-201ENST00000233330 ALX1Q15699 326 aa23.14■■□□□ 1.29
RTKN-201ENST00000233330 C3orf67Q6ZVT6 689 aa23.14■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms