RNA–Protein interactions for RNA: ENST00000227507.2

CCND1-201, Transcript of cyclin D1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCND1, Length 4,307 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCND1-201ENST00000227507 TTLL5Q6EMB2 1281 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 METTL22Q9BUU2 404 aaPredicted RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 ANO10Q9NW15 660 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 NEMFO60524 1076 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 SERPINC1P01008 464 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 RBM5P52756 815 aaKnown RBP eCLIP13.32□□□□□ -0.289e-7■■■□□ 18.4
CCND1-201ENST00000227507 CREB3L3Q68CJ9 461 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 STK11IPQ8N1F8 1099 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 ZCCHC17Q9NP64 241 aaKnown RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 GTF3C5Q9Y5Q8 519 aaPredicted RBP13.32□□□□□ -0.28
CCND1-201ENST00000227507 SPATA31A6Q5VVP1 1343 aa13.32□□□□□ -0.28
CCND1-201ENST00000227507 C3P01024 1663 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 POLD1P28340 1107 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 FTOQ9C0B1 505 aaKnown RBP eCLIP13.31□□□□□ -0.28
CCND1-201ENST00000227507 SOS2Q07890 1332 aaPredicted RBP13.31□□□□□ -0.28
CCND1-201ENST00000227507 LOC102724428A0A0B4J2F2 783 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 SEC31AO94979 1220 aaKnown RBP13.31□□□□□ -0.28
CCND1-201ENST00000227507 SIK1P57059 783 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 PTPN21Q16825 1174 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 IFNKQ9P0W0 207 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 LMOD1P29536 600 aaPredicted RBP13.31□□□□□ -0.28
CCND1-201ENST00000227507 FAM43BQ6ZT52 329 aaPredicted RBP13.31□□□□□ -0.28
CCND1-201ENST00000227507 CCDC191Q8NCU4 936 aa13.31□□□□□ -0.28
CCND1-201ENST00000227507 MYO3AQ8NEV4 1616 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 SH3TC1Q8TE82 1336 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 DHX16O60231 1041 aaKnown RBP13.3□□□□□ -0.28
CCND1-201ENST00000227507 CREBRFQ8IUR6 639 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 USP44Q9H0E7 712 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 TSPYL1Q9H0U9 437 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 ECHDC1Q9NTX5 307 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 FBXO3Q9UK99 471 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 ASAP1Q9ULH1 1129 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 NBPF7P0C2Y1 421 aaPredicted RBP13.3□□□□□ -0.28
CCND1-201ENST00000227507 SART3Q15020 963 aaKnown RBP13.3□□□□□ -0.28
CCND1-201ENST00000227507 ANKRD1Q15327 319 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.3□□□□□ -0.28
CCND1-201ENST00000227507 GPATCH11Q8N954 259 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 TTC14Q96N46 770 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 SHPRHQ149N8 1683 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 GYS2P54840 703 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 STK38Q15208 465 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 CFAP100Q494V2 611 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 FAM182BQ5T319 152 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 EPC1Q9H2F5 836 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 RSPH14Q9UHP6 348 aa13.3□□□□□ -0.28
CCND1-201ENST00000227507 CTDP1Q9Y5B0 961 aaPredicted RBP13.3□□□□□ -0.28
CCND1-201ENST00000227507 KIF2AO00139 706 aaPredicted RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 GTF2A1P52655 376 aaPredicted RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 NMIQ13287 307 aaPredicted RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 TDRD7Q8NHU6 1098 aaKnown RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 CARD6Q9BX69 1037 aa13.29□□□□□ -0.28
CCND1-201ENST00000227507 IL15P40933 162 aaPredicted RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 CLCN6P51797 869 aa13.29□□□□□ -0.28
CCND1-201ENST00000227507 RBM6P78332 1123 aaKnown RBP13.29□□□□□ -0.28
CCND1-201ENST00000227507 CNBD1Q8NA66 436 aa13.29□□□□□ -0.28
CCND1-201ENST00000227507 CYP27B1O15528 508 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 CAPN2P17655 700 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 FAM89AQ96GI7 184 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 CWC15Q9P013 229 aaKnown RBP13.28□□□□□ -0.28
CCND1-201ENST00000227507 OVOS2A0A0J9YW53 1432 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 TRIM37O94972 964 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 MAP3K12Q12852 859 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 MCM6Q14566 821 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 OVOS2Q6IE36 1432 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 PLA2G4DQ86XP0 818 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 STAP2Q9UGK3 403 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 POLR3DP05423 398 aaPredicted RBP13.28□□□□□ -0.28
CCND1-201ENST00000227507 ZNF526Q8TF50 670 aaPredicted RBP13.28□□□□□ -0.28
CCND1-201ENST00000227507 AIDAQ96BJ3 306 aa13.28□□□□□ -0.28
CCND1-201ENST00000227507 A0A1B0GVL5 298 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 GSDMDP57764 484 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 RRP12Q5JTH9 1297 aaKnown RBP13.27□□□□□ -0.28
CCND1-201ENST00000227507 TMOD2Q9NZR1 351 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 LRRC7Q96NW7 1537 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 TRIM29Q14134 588 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 SYCP1Q15431 976 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 PLCD4Q9BRC7 762 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 PNPLA6Q8IY17 1366 aa13.27□□□□□ -0.28
CCND1-201ENST00000227507 CRB1P82279 1406 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 MST1RQ04912 1400 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 CPS1P31327 1500 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 GNG11P61952 73 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 LEKR1Q6ZMV7 388 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 RAB11FIP4Q86YS3 637 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 GOLGA6L1Q8N7Z2 621 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 PGBD1Q96JS3 809 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 LOC102724159A0A0B4J2E5 919 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 PWP2Q15269 919 aaKnown RBP13.27□□□□□ -0.29
CCND1-201ENST00000227507 DZIP1Q86YF9 867 aaKnown RBP13.27□□□□□ -0.29
CCND1-201ENST00000227507 NDUFB9Q9Y6M9 179 aa13.27□□□□□ -0.29
CCND1-201ENST00000227507 TDO2P48775 406 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 PHACTR2O75167 634 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 PNMA6AP0CW24 399 aaPredicted RBP13.26□□□□□ -0.29
CCND1-201ENST00000227507 FLAD1Q8NFF5 587 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 ZSWIM6Q9HCJ5 1215 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP13.26□□□□□ -0.292e-9■□□□□ 9
CCND1-201ENST00000227507 SLC27A2O14975 620 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 EVCP57679 992 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 GOLGA8FQ08AF8 430 aa13.26□□□□□ -0.29
CCND1-201ENST00000227507 GOLGA8DPQ0D2H9 430 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms