RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 RCOR1Q9UKL0 485 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 CLIC4Q9Y696 253 aa17.13■□□□□ 0.33
CNOT3-201ENST00000221232 RFX7Q2KHR2 1363 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 STARD3NLO95772 234 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 TERF1P54274 439 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 AIFM3Q96NN9 605 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 GOLGA6L19H0YKK7 550 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 ZNF274Q96GC6 653 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-201ENST00000221232 DNAJC5Q9H3Z4 198 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 ORC3Q9UBD5 711 aaPredicted RBP17.12■□□□□ 0.33
CNOT3-201ENST00000221232 CARMIL3Q8ND23 1372 aa17.12■□□□□ 0.33
CNOT3-201ENST00000221232 KINO60870 393 aaKnown RBP17.11■□□□□ 0.33
CNOT3-201ENST00000221232 PCCAP05165 728 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ZNF75DP51815 510 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ARID5BQ14865 1188 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 TTLL11Q8NHH1 800 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 C8orf76Q96K31 380 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 PDCL3Q9H2J4 239 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 CTNNA3Q9UI47 895 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 KIF3AQ9Y496 699 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 STRCP1A6NGW2 1772 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 IRS4O14654 1257 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ISM2Q6H9L7 571 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 APPBP2Q92624 585 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ZNF396Q96N95 335 aaPredicted RBP17.11■□□□□ 0.33
CNOT3-201ENST00000221232 SDF4Q9BRK5 362 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 CLIP2Q9UDT6 1046 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 PCDHA7Q9UN72 937 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 LMTK3Q96Q04 1460 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ANTXR2P58335 489 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 SNW1Q13573 536 aaKnown RBP17.11■□□□□ 0.33
CNOT3-201ENST00000221232 NLRP10Q86W26 655 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 AGXT2Q9BYV1 514 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 ZBTB1Q9Y2K1 713 aa17.11■□□□□ 0.33
CNOT3-201ENST00000221232 COL5A2P05997 1499 aaPredicted RBP17.1■□□□□ 0.33
CNOT3-201ENST00000221232 BECN2A8MW95 431 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 BIN1O00499 593 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 SLC4A9Q96Q91 983 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 SENP2Q9HC62 589 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 PIH1D3Q9NQM4 214 aaKnown RBP17.1■□□□□ 0.33
CNOT3-201ENST00000221232 PHKA1P46020 1223 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 STK38Q15208 465 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 CCDC144BQ3MJ40 725 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 MYL10Q9BUA6 226 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 RIPOR2Q9Y4F9 1068 aa17.1■□□□□ 0.33
CNOT3-201ENST00000221232 CSF1RP07333 972 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 GIGYF2Q6Y7W6 1299 aaKnown RBP17.09■□□□□ 0.33
CNOT3-201ENST00000221232 RBM43Q6ZSC3 357 aaKnown RBP17.09■□□□□ 0.33
CNOT3-201ENST00000221232 NCOA7Q8NI08 942 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 HPS5Q9UPZ3 1129 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 ANKRD18BA2A2Z9 1011 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 DYNC1I1O14576 645 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 KCPQ6ZWJ8 1503 aa17.09■□□□□ 0.33
CNOT3-201ENST00000221232 MARCKSP29966 332 aaPredicted RBP17.08■□□□□ 0.33
CNOT3-201ENST00000221232 NDUFA8P51970 172 aa17.08■□□□□ 0.33
CNOT3-201ENST00000221232 LRRFIP1Q32MZ4 808 aaKnown RBP17.08■□□□□ 0.33
CNOT3-201ENST00000221232 FILIP1Q7Z7B0 1213 aa17.08■□□□□ 0.33
CNOT3-201ENST00000221232 MYRIPQ8NFW9 859 aa17.08■□□□□ 0.33
CNOT3-201ENST00000221232 PHKBQ93100 1093 aa17.08■□□□□ 0.33
CNOT3-201ENST00000221232 C16orf45Q96MC5 204 aaPredicted RBP17.08■□□□□ 0.33
CNOT3-201ENST00000221232 MAP3K15Q6ZN16 1313 aa17.08■□□□□ 0.33
CNOT3-201ENST00000221232 B4E1Z4 1266 aa17.08■□□□□ 0.32
CNOT3-201ENST00000221232 MB21D2Q8IYB1 491 aaPredicted RBP17.08■□□□□ 0.32
CNOT3-201ENST00000221232 SPTLC3Q9NUV7 552 aa17.08■□□□□ 0.32
CNOT3-201ENST00000221232 WWC3Q9ULE0 1092 aa17.08■□□□□ 0.32
CNOT3-201ENST00000221232 SALL1Q9NSC2 1324 aa17.08■□□□□ 0.32
CNOT3-201ENST00000221232 SOS2Q07890 1332 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-201ENST00000221232 KIF28PB7ZC32 967 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 UBE2Q2LH0YL09 131 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 CYB5R4Q7L1T6 521 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 TDRD7Q8NHU6 1098 aaKnown RBP17.07■□□□□ 0.32
CNOT3-201ENST00000221232 ZNF532Q9HCE3 1301 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 ZFYP08048 801 aaPredicted RBP17.07■□□□□ 0.32
CNOT3-201ENST00000221232 CTSWP56202 376 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 TRDNQ13061 729 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 MICU3Q86XE3 530 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 TBC1D10CQ8IV04 446 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 CACTINQ8WUQ7 758 aaKnown RBP17.07■□□□□ 0.32
CNOT3-201ENST00000221232 GLI3P10071 1580 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 DCCP43146 1447 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 IQCB1Q15051 598 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 ZSCAN25Q6NSZ9 544 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 PLA2G4DQ86XP0 818 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 CCDC82Q8N4S0 544 aa17.07■□□□□ 0.32
CNOT3-201ENST00000221232 FAM160A1Q05DH4 1040 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 CCDC102BQ68D86 513 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 AOPEPQ8N6M6 819 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.06■□□□□ 0.326e-7■■■□□ 16.2
CNOT3-201ENST00000221232 NBPF3Q9H094 633 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 TRIM28Q13263 835 aaKnown RBP17.06■□□□□ 0.32
CNOT3-201ENST00000221232 GLIPR1L2Q4G1C9 344 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 SYNE3Q6ZMZ3 975 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 ENGASEQ8NFI3 743 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.06■□□□□ 0.32
CNOT3-201ENST00000221232 TOMM22Q9NS69 142 aa17.06■□□□□ 0.32
CNOT3-201ENST00000221232 STX1AQ16623 288 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 NFXL1Q6ZNB6 911 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 FBXO18Q8NFZ0 1043 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 ZNF592Q92610 1267 aa17.05■□□□□ 0.32
CNOT3-201ENST00000221232 IQSEC3Q9UPP2 1182 aaPredicted RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 84.6 ms