RNA–Protein interactions for RNA: ENST00000215956.9

SNU13-201, Transcript of small nuclear ribonucleoprotein 13, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNU13, Length 1,630 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNU13-201ENST00000215956 SRGAP3O43295 1099 aa14.99□□□□□ -0.01
SNU13-201ENST00000215956 SF3B3Q15393 1217 aaKnown RBP14.99□□□□□ -0.01
SNU13-201ENST00000215956 HPS5Q9UPZ3 1129 aa14.99□□□□□ -0.01
SNU13-201ENST00000215956 PNMA6EA0A0J9YXQ4 647 aa14.99□□□□□ -0.01
SNU13-201ENST00000215956 VIL1P09327 827 aaKnown RBP14.99□□□□□ -0.01
SNU13-201ENST00000215956 CWF19L2Q2TBE0 894 aaKnown RBP14.99□□□□□ -0.01
SNU13-201ENST00000215956 TBC1D16Q8TBP0 767 aa14.99□□□□□ -0.01
SNU13-201ENST00000215956 MKI67P46013 3256 aaKnown RBP14.98□□□□□ -0.01
SNU13-201ENST00000215956 IGKV5-2P06315 115 aa14.98□□□□□ -0.01
SNU13-201ENST00000215956 KIF1BPQ96EK5 621 aa14.98□□□□□ -0.01
SNU13-201ENST00000215956 FAM89AQ96GI7 184 aa14.98□□□□□ -0.01
SNU13-201ENST00000215956 ZNF609O15014 1411 aa14.97□□□□□ -0.01
SNU13-201ENST00000215956 SURF6O75683 361 aaKnown RBP14.97□□□□□ -0.01
SNU13-201ENST00000215956 PKN2Q16513 984 aaKnown RBP14.97□□□□□ -0.01
SNU13-201ENST00000215956 ANGEL2Q5VTE6 544 aaKnown RBP14.97□□□□□ -0.01
SNU13-201ENST00000215956 CCDC191Q8NCU4 936 aa14.97□□□□□ -0.01
SNU13-201ENST00000215956 ZC3H12CQ9C0D7 883 aaKnown RBP14.97□□□□□ -0.01
SNU13-201ENST00000215956 NOP58Q9Y2X3 529 aaKnown RBP14.97□□□□□ -0.01
SNU13-201ENST00000215956 FKBP1BP68106 108 aa14.96□□□□□ -0.01
SNU13-201ENST00000215956 PLEKHM2Q8IWE5 1019 aa14.96□□□□□ -0.01
SNU13-201ENST00000215956 ISCA1Q9BUE6 129 aa14.96□□□□□ -0.01
SNU13-201ENST00000215956 OSBPL3Q9H4L5 887 aa14.96□□□□□ -0.01
SNU13-201ENST00000215956 CWC25Q9NXE8 425 aaPredicted RBP14.96□□□□□ -0.01
SNU13-201ENST00000215956 AOX1Q06278 1338 aa14.96□□□□□ -0.02
SNU13-201ENST00000215956 ZNF280AP59817 542 aaPredicted RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 SCARF1Q14162 830 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 CASC1Q6TDU7 716 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 HDAC9Q9UKV0 1011 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 EXOC6BQ9Y2D4 811 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 HTTP42858 3142 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 ATP5J2-PTCD1G3V325 749 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 G3V3G9 751 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 UFL1O94874 794 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 RPS8P62241 208 aaKnown RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 TRIM28Q13263 835 aaKnown RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 OS9Q13438 667 aaPredicted RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 RTL5Q5HYW3 569 aaPredicted RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 DCAF8Q5TAQ9 597 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 ZNF296Q8WUU4 475 aaPredicted RBP14.95□□□□□ -0.02
SNU13-201ENST00000215956 SUCLG2Q96I99 432 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 PODXL2Q9NZ53 605 aa14.95□□□□□ -0.02
SNU13-201ENST00000215956 CENPFP49454 3210 aa14.94□□□□□ -0.02
SNU13-201ENST00000215956 PITPNM2Q9BZ72 1349 aa14.94□□□□□ -0.02
SNU13-201ENST00000215956 IRS4O14654 1257 aaPredicted RBP14.94□□□□□ -0.02
SNU13-201ENST00000215956 RSBN1LQ6PCB5 846 aaPredicted RBP14.94□□□□□ -0.02
SNU13-201ENST00000215956 AGBL3Q8NEM8 1001 aa14.94□□□□□ -0.02
SNU13-201ENST00000215956 IPO9Q96P70 1041 aaKnown RBP14.94□□□□□ -0.02
SNU13-201ENST00000215956 APBB1O00213 710 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 CDC45O75419 566 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 TBC1D8O95759 1140 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 G3BP1Q13283 466 aaKnown RBP eCLIP14.93□□□□□ -0.02
SNU13-201ENST00000215956 MOB2Q70IA6 237 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 ANKIB1Q9P2G1 1089 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 GGA1Q9UJY5 639 aa14.93□□□□□ -0.02
SNU13-201ENST00000215956 RHPN1Q8TCX5 695 aa14.92□□□□□ -0.02
SNU13-201ENST00000215956 BICC1Q9H694 974 aaKnown RBP14.92□□□□□ -0.02
SNU13-201ENST00000215956 MYOZ2Q9NPC6 264 aa14.92□□□□□ -0.02
SNU13-201ENST00000215956 H7C1W4 665 aa14.92□□□□□ -0.02
SNU13-201ENST00000215956 RABL6Q3YEC7 729 aaPredicted RBP14.92□□□□□ -0.02
SNU13-201ENST00000215956 CLASRPQ8N2M8 674 aaKnown RBP14.92□□□□□ -0.02
SNU13-201ENST00000215956 GPATCH3Q96I76 525 aa14.92□□□□□ -0.02
SNU13-201ENST00000215956 SCAF8Q9UPN6 1271 aaKnown RBP14.92□□□□□ -0.02
SNU13-201ENST00000215956 ZNF646O15015 1829 aaPredicted RBP14.91□□□□□ -0.02
SNU13-201ENST00000215956 UBE2Q2LH0YL09 131 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 SMARCA5O60264 1052 aaPredicted RBP14.91□□□□□ -0.02
SNU13-201ENST00000215956 USP17L8P0C7I0 530 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 MX1P20591 662 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 PDE1AP54750 535 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 NOM1Q5C9Z4 860 aaKnown RBP14.91□□□□□ -0.02
SNU13-201ENST00000215956 FBXO46Q6PJ61 603 aaPredicted RBP14.91□□□□□ -0.02
SNU13-201ENST00000215956 UBE3BQ7Z3V4 1068 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 GMLQ99445 158 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 SEC31BQ9NQW1 1179 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 STAP2Q9UGK3 403 aa14.91□□□□□ -0.02
SNU13-201ENST00000215956 GPR25O00155 361 aa14.9□□□□□ -0.02
SNU13-201ENST00000215956 BRCA2P51587 3418 aa14.9□□□□□ -0.02
SNU13-201ENST00000215956 SPEF2Q9C093 1822 aa14.89□□□□□ -0.03
SNU13-201ENST00000215956 TM4SF4P48230 202 aa14.89□□□□□ -0.03
SNU13-201ENST00000215956 TTLL12Q14166 644 aaPredicted RBP14.89□□□□□ -0.03
SNU13-201ENST00000215956 ZBTB38Q8NAP3 1195 aaPredicted RBP14.89□□□□□ -0.03
SNU13-201ENST00000215956 DAXXQ9UER7 740 aaPredicted RBP14.89□□□□□ -0.03
SNU13-201ENST00000215956 ERC2O15083 957 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 PCCAP05165 728 aaPredicted RBP14.88□□□□□ -0.03
SNU13-201ENST00000215956 HSP90B1P14625 803 aaKnown RBP14.88□□□□□ -0.03
SNU13-201ENST00000215956 CASP7P55210 303 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 PRAMEF18Q5VWM3 479 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 KAZALD1Q96I82 304 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 COPRSQ9NQ92 184 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 XDHP47989 1333 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 TTC41PQ6P2S7 1318 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 SALL3Q9BXA9 1300 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 MYH3P11055 1940 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 USP17L3A6NCW0 530 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 USP17L4A6NCW7 530 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 SREBF2Q12772 1141 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 MKRN3Q13064 507 aaKnown RBP14.88□□□□□ -0.03
SNU13-201ENST00000215956 CCDC152Q4G0S7 254 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 ERICH6Q7L0X2 663 aa14.88□□□□□ -0.03
SNU13-201ENST00000215956 USP17L1Q7RTZ2 530 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms