RNA–Protein interactions for RNA: ENST00000199706.12

MRPL28-201, Transcript of mitochondrial ribosomal protein L28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL28, Length 1,098 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL28-201ENST00000199706 TBC1D22AQ8WUA7 517 aa21.58■■□□□ 1.05
MRPL28-201ENST00000199706 CREBZFQ9NS37 354 aa21.58■■□□□ 1.05
MRPL28-201ENST00000199706 HDAC9Q9UKV0 1011 aa21.58■■□□□ 1.05
MRPL28-201ENST00000199706 NOP58Q9Y2X3 529 aaKnown RBP21.58■■□□□ 1.05
MRPL28-201ENST00000199706 ECM29Q5VYK3 1845 aa21.57■■□□□ 1.04
MRPL28-201ENST00000199706 EGFRP00533 1210 aa21.57■■□□□ 1.04
MRPL28-201ENST00000199706 TBC1D10BQ4KMP7 808 aaPredicted RBP21.57■■□□□ 1.04
MRPL28-201ENST00000199706 CERS5Q8N5B7 392 aa21.57■■□□□ 1.04
MRPL28-201ENST00000199706 MTMR14Q8NCE2 650 aa21.57■■□□□ 1.04
MRPL28-201ENST00000199706 SEMA3EO15041 775 aa21.56■■□□□ 1.04
MRPL28-201ENST00000199706 CDC37L1Q7L3B6 337 aa21.56■■□□□ 1.04
MRPL28-201ENST00000199706 FBXW7Q969H0 707 aa21.56■■□□□ 1.04
MRPL28-201ENST00000199706 YTHDC1Q96MU7 727 aaKnown RBP21.56■■□□□ 1.04
MRPL28-201ENST00000199706 COG6Q9Y2V7 657 aa21.56■■□□□ 1.04
MRPL28-201ENST00000199706 SUGT1Q9Y2Z0 365 aa21.56■■□□□ 1.04
MRPL28-201ENST00000199706 POLR2AP24928 1970 aaKnown RBP21.56■■□□□ 1.04
MRPL28-201ENST00000199706 PDS5AQ29RF7 1337 aaKnown RBP21.55■■□□□ 1.04
MRPL28-201ENST00000199706 G3BP1Q13283 466 aaKnown RBP eCLIP21.55■■□□□ 1.045e-9■□□□□ 10.7
MRPL28-201ENST00000199706 RPAP2Q8IXW5 612 aaPredicted RBP21.55■■□□□ 1.04
MRPL28-201ENST00000199706 ZBED3Q96IU2 234 aaPredicted RBP21.55■■□□□ 1.04
MRPL28-201ENST00000199706 MXD3Q9BW11 206 aa21.55■■□□□ 1.04
MRPL28-201ENST00000199706 C1orf115Q9H7X2 142 aa21.55■■□□□ 1.04
MRPL28-201ENST00000199706 GPR108Q9NPR9 543 aa21.55■■□□□ 1.04
MRPL28-201ENST00000199706 BCAMP50895 628 aa21.54■■□□□ 1.04
MRPL28-201ENST00000199706 MFSD14BQ5SR56 506 aa21.54■■□□□ 1.04
MRPL28-201ENST00000199706 KIAA0825Q8IV33 1275 aa21.54■■□□□ 1.04
MRPL28-201ENST00000199706 GNL3LQ9NVN8 582 aaKnown RBP21.54■■□□□ 1.04
MRPL28-201ENST00000199706 TMEM88BA6NKF7 163 aa21.53■■□□□ 1.04
MRPL28-201ENST00000199706 TFCP2Q12800 502 aa21.53■■□□□ 1.04
MRPL28-201ENST00000199706 DCPSQ96C86 337 aaKnown RBP21.53■■□□□ 1.04
MRPL28-201ENST00000199706 A0A1B0GUL7 405 aa21.52■■□□□ 1.04
MRPL28-201ENST00000199706 DNAJC5GQ8N7S2 189 aa21.52■■□□□ 1.04
MRPL28-201ENST00000199706 GGA3Q9NZ52 723 aa21.52■■□□□ 1.04
MRPL28-201ENST00000199706 COL1A1P02452 1464 aaPredicted RBP21.52■■□□□ 1.03
MRPL28-201ENST00000199706 WNT10BO00744 389 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 HMMRO75330 724 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 RRP1P56182 461 aaKnown RBP21.51■■□□□ 1.03
MRPL28-201ENST00000199706 HDLBPQ00341 1268 aaKnown RBP21.51■■□□□ 1.03
MRPL28-201ENST00000199706 SCARF1Q14162 830 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 C20orf194Q5TEA3 1177 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 KRT26Q7Z3Y9 468 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 WDR66Q8TBY9 1149 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 SERPINA10Q9UK55 444 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 SALL1Q9NSC2 1324 aa21.51■■□□□ 1.03
MRPL28-201ENST00000199706 FRAT2O75474 233 aaPredicted RBP21.5■■□□□ 1.03
MRPL28-201ENST00000199706 SURF6O75683 361 aaKnown RBP21.5■■□□□ 1.03
MRPL28-201ENST00000199706 HSP90AB4PQ58FF6 505 aa21.5■■□□□ 1.03
MRPL28-201ENST00000199706 RBM26Q5T8P6 1007 aaKnown RBP21.5■■□□□ 1.03
MRPL28-201ENST00000199706 ERC1Q8IUD2 1116 aa21.5■■□□□ 1.03
MRPL28-201ENST00000199706 SULF1Q8IWU6 871 aa21.5■■□□□ 1.03
MRPL28-201ENST00000199706 MRIQ9BWK5 157 aa21.5■■□□□ 1.03
MRPL28-201ENST00000199706 GLIS2Q9BZE0 524 aaPredicted RBP21.5■■□□□ 1.03
MRPL28-201ENST00000199706 MAST3O60307 1309 aa21.5■■□□□ 1.03
MRPL28-201ENST00000199706 CCDC102BQ68D86 513 aa21.49■■□□□ 1.03
MRPL28-201ENST00000199706 DENND2AQ9ULE3 1009 aa21.49■■□□□ 1.03
MRPL28-201ENST00000199706 SPDYE2BA6NHP3 402 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 SPDYE6P0CI01 402 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 PHKA1P46020 1223 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 DLGAP5Q15398 846 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 ANGEL2Q5VTE6 544 aaKnown RBP21.48■■□□□ 1.03
MRPL28-201ENST00000199706 KLRG1Q96E93 195 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 XAGE2Q96GT9 111 aa21.48■■□□□ 1.03
MRPL28-201ENST00000199706 TRAF5O00463 557 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 ADORA1P30542 326 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 TIMM10P62072 90 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 OS9Q13438 667 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-201ENST00000199706 NBPF9Q3BBW0 867 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 APOBEC3FQ8IUX4 373 aaKnown RBP21.47■■□□□ 1.03
MRPL28-201ENST00000199706 TTF2Q9UNY4 1162 aaKnown RBP21.47■■□□□ 1.03
MRPL28-201ENST00000199706 IQSEC3Q9UPP2 1182 aaPredicted RBP21.47■■□□□ 1.03
MRPL28-201ENST00000199706 JAG2Q9Y219 1238 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 CNTNAP1P78357 1384 aa21.47■■□□□ 1.03
MRPL28-201ENST00000199706 RASSF10A6NK89 507 aa21.46■■□□□ 1.03
MRPL28-201ENST00000199706 CHAF1AQ13111 956 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-201ENST00000199706 TNNI3KQ59H18 835 aa21.46■■□□□ 1.03
MRPL28-201ENST00000199706 CST9Q5W186 159 aa21.46■■□□□ 1.03
MRPL28-201ENST00000199706 ZGPATQ8N5A5 531 aaKnown RBP21.46■■□□□ 1.03
MRPL28-201ENST00000199706 HHIPL1Q96JK4 782 aa21.46■■□□□ 1.03
MRPL28-201ENST00000199706 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-201ENST00000199706 FPGT-TNNI3KV9GXZ4 949 aa21.46■■□□□ 1.03
MRPL28-201ENST00000199706 ASTN2O75129 1339 aaPredicted RBP21.46■■□□□ 1.03
MRPL28-201ENST00000199706 MYO1BO43795 1136 aa21.45■■□□□ 1.02
MRPL28-201ENST00000199706 ARID4AP29374 1257 aaPredicted RBP21.45■■□□□ 1.02
MRPL28-201ENST00000199706 CFAP100Q494V2 611 aa21.45■■□□□ 1.02
MRPL28-201ENST00000199706 USP48Q86UV5 1035 aa21.45■■□□□ 1.02
MRPL28-201ENST00000199706 SIRT2Q8IXJ6 389 aa21.45■■□□□ 1.02
MRPL28-201ENST00000199706 RASGRF1Q13972 1273 aa21.44■■□□□ 1.02
MRPL28-201ENST00000199706 JMYQ8N9B5 988 aa21.44■■□□□ 1.02
MRPL28-201ENST00000199706 ZNF512BQ96KM6 892 aaPredicted RBP21.44■■□□□ 1.02
MRPL28-201ENST00000199706 PPP2R3BQ9Y5P8 575 aa21.44■■□□□ 1.02
MRPL28-201ENST00000199706 THSD7BQ9C0I4 1608 aa21.44■■□□□ 1.02
MRPL28-201ENST00000199706 PAPPA2Q9BXP8 1791 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 ADM5C9JUS6 153 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 F8W031 263 aaPredicted RBP21.43■■□□□ 1.02
MRPL28-201ENST00000199706 IGSF3O75054 1194 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 CELF2O95319 508 aaKnown RBP21.43■■□□□ 1.02
MRPL28-201ENST00000199706 UQCRFS1P1P0C7P4 283 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 HTRA3P83110 453 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 HHIPL2Q6UWX4 724 aa21.43■■□□□ 1.02
MRPL28-201ENST00000199706 TEKT1Q969V4 418 aa21.43■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms