RNA–Protein interactions for RNA: ENSMUST00000173009.7

Lig3-209, Transcript of DNA ligase 3, mousemouse

TSL 1 (best) BASIC

Gene Lig3, Length 1,785 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig3-209ENSMUST00000173009 Gm3893E9Q1I1 302 aa24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Psmd14O35593 310 aa24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Pdia3P27773 505 aaKnown RBP24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Map9Q3TRR0 646 aa24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Sept12Q9D451 317 aa24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Npc1l1Q6T3U4 1333 aa24.07■■□□□ 1.44
Lig3-209ENSMUST00000173009 Zc3h15Q3TIV5 426 aaKnown RBP24.06■■□□□ 1.44
Lig3-209ENSMUST00000173009 Pus3Q9JI38 481 aa24.06■■□□□ 1.44
Lig3-209ENSMUST00000173009 Cfap69Q8BH53 942 aa24.06■■□□□ 1.44
Lig3-209ENSMUST00000173009 Tmem179Q8BHH9 233 aa24.06■■□□□ 1.44
Lig3-209ENSMUST00000173009 MthfsQ9D110 203 aa24.06■■□□□ 1.44
Lig3-209ENSMUST00000173009 CpdO89001 1377 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Megf6Q80V70 1572 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Siah1aP61092 282 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Usp48Q3V0C5 1052 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Large2Q5XPT3 690 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Tor1aip2Q8BYU6 502 aa24.05■■□□□ 1.44
Lig3-209ENSMUST00000173009 Ifi207E9Q3L4 978 aa24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Eif6O55135 245 aa24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Hsp90b1P08113 802 aaKnown RBP24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Tbc1d9Q3UYK3 1264 aa24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Krt40Q6IFX3 439 aa24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Gm2163Q6PCY5 473 aa24.04■■□□□ 1.44
Lig3-209ENSMUST00000173009 Zcwpw1Q6IR42 630 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Gm38655A0A286YDK6 273 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Washc4Q3UMB9 1173 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Ccdc93Q7TQK5 629 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Lmod1Q8BVA4 595 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Spon1Q8VCC9 807 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Myh3P13541 1940 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Scn9aQ62205 1984 aa24.03■■□□□ 1.44
Lig3-209ENSMUST00000173009 Trim30dE9PWL0 497 aa24.02■■□□□ 1.44
Lig3-209ENSMUST00000173009 Mdm2P23804 489 aa24.02■■□□□ 1.44
Lig3-209ENSMUST00000173009 Cyp2d10P24456 504 aa24.02■■□□□ 1.44
Lig3-209ENSMUST00000173009 Bmp2kQ91Z96 1138 aa24.02■■□□□ 1.44
Lig3-209ENSMUST00000173009 Glrx3Q9CQM9 337 aa24.02■■□□□ 1.44
Lig3-209ENSMUST00000173009 Cdcp1Q5U462 833 aa24.01■■□□□ 1.43
Lig3-209ENSMUST00000173009 Ripk4Q9ERK0 786 aa24.01■■□□□ 1.43
Lig3-209ENSMUST00000173009 Tom1l2Q5SRX1 507 aa24.01■■□□□ 1.43
Lig3-209ENSMUST00000173009 Pcdhb5Q91XZ5 792 aa24.01■■□□□ 1.43
Lig3-209ENSMUST00000173009 Lrch1P62046 709 aa24■■□□□ 1.43
Lig3-209ENSMUST00000173009 Ptrh1Q8BW00 204 aa24■■□□□ 1.43
Lig3-209ENSMUST00000173009 IcoslgQ9JHJ8 322 aa24■■□□□ 1.43
Lig3-209ENSMUST00000173009 Stk32bQ9JJX8 414 aa24■■□□□ 1.43
Lig3-209ENSMUST00000173009 Chd5A2A8L1 1946 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 Krt24A1L317 512 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 Dcdc2bF7BCK0 340 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 Cyp24a1Q64441 514 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 ParnQ8VDG3 624 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 Myh13B1AR69 1938 aa23.99■■□□□ 1.43
Lig3-209ENSMUST00000173009 GabreA2AMW3 916 aa23.98■■□□□ 1.43
Lig3-209ENSMUST00000173009 Psme4Q5SSW2 1843 aa23.98■■□□□ 1.43
Lig3-209ENSMUST00000173009 Ppfia1B2RXQ2 1266 aa23.98■■□□□ 1.43
Lig3-209ENSMUST00000173009 AsnsQ61024 561 aa23.98■■□□□ 1.43
Lig3-209ENSMUST00000173009 Ppp6r3Q922D4 844 aa23.98■■□□□ 1.43
Lig3-209ENSMUST00000173009 Zfp646Q6NV66 1788 aa23.97■■□□□ 1.43
Lig3-209ENSMUST00000173009 Col20a1Q923P0 1320 aa23.97■■□□□ 1.43
Lig3-209ENSMUST00000173009 Appbp2Q9DAX9 585 aa23.97■■□□□ 1.43
Lig3-209ENSMUST00000173009 Jag1Q9QXX0 1218 aa23.97■■□□□ 1.43
Lig3-209ENSMUST00000173009 Nfe2l3Q9WTM4 660 aa23.97■■□□□ 1.43
Lig3-209ENSMUST00000173009 Nucb1Q02819 459 aaKnown RBP23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Olfm5Q8BU90 496 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Lmbrd2Q8C561 694 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Cxcl11Q9JHH5 100 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Col1a1P11087 1453 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Anapc15-psA0A140T8L6 141 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Cyp2d9P11714 504 aa23.96■■□□□ 1.43
Lig3-209ENSMUST00000173009 Dhx16G3X8X0 1044 aaKnown RBP23.95■■□□□ 1.42
Lig3-209ENSMUST00000173009 GmpsQ3THK7 693 aa23.95■■□□□ 1.42
Lig3-209ENSMUST00000173009 Ddx11Q6AXC6 880 aa23.95■■□□□ 1.42
Lig3-209ENSMUST00000173009 Glis2Q8VDL9 521 aa23.95■■□□□ 1.42
Lig3-209ENSMUST00000173009 Ecm29Q6PDI5 1840 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Ccdc183A2AJB1 534 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Dynll1P63168 89 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Spata18Q0P557 537 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Mb21d2Q8C525 428 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Erc1Q99MI1 1120 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 1700018B08RikQ9DA83 213 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 Epb41l3Q9WV92 929 aa23.94■■□□□ 1.42
Lig3-209ENSMUST00000173009 MecomP14404 1042 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 Slc10a5Q5PT54 434 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 Map3k12Q60700 888 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 Trim56Q80VI1 734 aaKnown RBP23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 Pet2A2AHY8 747 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 D1Pas1P16381 660 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 CrkQ64010 304 aa23.93■■□□□ 1.42
Lig3-209ENSMUST00000173009 Adgra3Q7TT36 1310 aa23.92■■□□□ 1.42
Lig3-209ENSMUST00000173009 Nolc1E9Q5C9 702 aaKnown RBP23.92■■□□□ 1.42
Lig3-209ENSMUST00000173009 Tm4sf1Q64302 202 aa23.92■■□□□ 1.42
Lig3-209ENSMUST00000173009 Ankrd13aQ80UP5 588 aa23.92■■□□□ 1.42
Lig3-209ENSMUST00000173009 Mboat7Q8CHK3 473 aa23.92■■□□□ 1.42
Lig3-209ENSMUST00000173009 Pcdhb9E9Q5G2 828 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Adam7O35227 789 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 SpidrQ8BGX7 933 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Hps4Q99KG7 671 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Myh7Q91Z83 1935 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Arid4aF8VPQ2 1261 aaKnown RBP23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Nek11Q8C0Q4 628 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Top1mtQ8R4U6 593 aa23.91■■□□□ 1.42
Lig3-209ENSMUST00000173009 Pold4Q9CWP8 107 aa23.91■■□□□ 1.42
Retrieved 100 of 22,080 RNA–protein pairs in 105 ms