RNA–Protein interactions for RNA: ENSMUST00000113706.9

Trim39-203, Transcript of E3 ubiquitin-protein ligase TRIM39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim39, Length 3,204 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim39-203ENSMUST00000113706 Mast3Q3U214 1321 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Gm7347D3YYI9 267 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Speer4aF8VPX6 267 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Pald1P70261 859 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Washc4Q3UMB9 1173 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Me3Q8BMF3 604 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Sde2Q8K1J5 448 aaKnown RBP18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Cep57l1Q8VDS7 400 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Naa16Q9DBB4 864 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Slurp2P0DP59 97 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Rhbdl3P58873 404 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Rps8P62242 208 aaKnown RBP18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Iffo2Q8R2V2 512 aa18.73■□□□□ 0.59
Trim39-203ENSMUST00000113706 Zfp113Q8C689 439 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 BrapQ99MP8 591 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Adarb2Q9JI20 745 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Pes1Q9EQ61 584 aaKnown RBP18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Zbtb7aO88939 569 aaKnown RBP18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Cnot6lQ8VEG6 555 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 NaspQ99MD9 773 aaKnown RBP18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Pde3aQ9Z0X4 1141 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Irs4Q9Z0Y7 1216 aa18.72■□□□□ 0.59
Trim39-203ENSMUST00000113706 Map3k15A2AQW0 1331 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Krt24A1L317 512 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Cd22P35329 862 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Acap3Q6NXL5 833 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Pknox2Q8BG99 474 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 HlfQ8BW74 295 aa18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Rbm33Q9CXK9 1231 aaKnown RBP18.71■□□□□ 0.59
Trim39-203ENSMUST00000113706 Frmd7A2AD83 703 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ccdc178Q8CDV0 866 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Sytl4Q9R0Q1 673 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Mad1l1Q9WTX8 717 aaKnown RBP18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rbbp6P97868 1790 aaKnown RBP18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Arfgef1G3X9K3 1846 aaKnown RBP18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 EvplQ9D952 2035 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Izumo3A6PWV3 263 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Aknad1E9Q8N6 675 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Babam1Q3UI43 333 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 ZwintQ9CQU5 252 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ankrd63A2ARS0 390 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ube2hP62257 183 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Cct2P80314 535 aaKnown RBP18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Leo1Q5XJE5 667 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ccdc66Q6NS45 935 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ces1dQ8VCT4 565 aa18.7■□□□□ 0.58
Trim39-203ENSMUST00000113706 Heg1E9Q7X6 1337 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Myo3bQ1EG27 1305 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Slc7a3P70423 618 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Akt1s1Q9D1F4 257 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Trim44Q9QXA7 346 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Phrf1A6H619 1682 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Myh2G3UW82 1942 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Il15P48346 162 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Kiaa0319Q5SZV5 1081 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Znf609Q8BZ47 1413 aa18.69■□□□□ 0.58
Trim39-203ENSMUST00000113706 Tbc1d30Q69ZT9 766 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rbm26Q6NZN0 1012 aaKnown RBP18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Sh3tc1G3X9F6 1346 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Oas2E9Q9A9 742 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Prl7d1P04769 244 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Stat5bP42232 786 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Siah1aP61092 282 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Smarcc2Q6PDG5 1213 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rbm15bQ6PHZ5 887 aaKnown RBP18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Fsd1Q7TPM6 496 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Nxf7Q80SZ6 620 aaKnown RBP18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rnf214Q8BFU3 668 aaKnown RBP18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Snapc4Q8BP86 1333 aa18.68■□□□□ 0.58
Trim39-203ENSMUST00000113706 Atxn2lQ7TQH0 1049 aaKnown RBP18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Olfm5Q8BU90 496 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Kdm4aQ8BW72 1064 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Vars2Q3U2A8 1060 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Limch1Q3UH68 1057 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 ErmnQ5EBJ4 281 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Samm50Q8BGH2 469 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Zscan22Q8BGS5 496 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Cep55Q8BT07 462 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Sumf1Q8R0F3 372 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rbm43Q99J64 343 aa18.67■□□□□ 0.58
Trim39-203ENSMUST00000113706 Cyp3a59D3Z2W7 503 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 CrcpO35427 148 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Pcdhb22Q91XZ8 794 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Vmn2r23E9PXI5 849 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Pim2Q62070 370 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Cyp24a1Q64441 514 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Paxip1Q6NZQ4 1056 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Tmem59lQ7TNI2 337 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rufy2Q8R4C2 606 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Eaf2Q91ZD6 262 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 NapbP28663 298 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Ppfia3P60469 1194 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Wdr24Q8CFJ9 790 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Rbm5Q91YE7 815 aaKnown RBP18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Pold4Q9CWP8 107 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Zbtb43Q9DAI4 467 aa18.66■□□□□ 0.58
Trim39-203ENSMUST00000113706 Fsd2Q8BZ52 692 aa18.65■□□□□ 0.58
Trim39-203ENSMUST00000113706 Lipo1J3QME6 396 aa18.65■□□□□ 0.58
Trim39-203ENSMUST00000113706 Mapkapk5O54992 473 aa18.65■□□□□ 0.58
Trim39-203ENSMUST00000113706 Znf326O88291 580 aa18.65■□□□□ 0.58
Retrieved 100 of 22,080 RNA–protein pairs in 17.6 ms