RNA–Protein interactions for RNA: ENSMUST00000113388.2

Chm-202, Transcript of Rab proteins geranylgeranyltransferase component A 1, mousemouse

TSL 1 (best) BASIC

Gene Chm, Length 4,749 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chm-202ENSMUST00000113388 Kdm4cQ8VCD7 1054 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Plekhh1Q80TI1 1356 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Gm44G3UW88 330 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Cfap69Q8BH53 942 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Gigyf1Q99MR1 1044 aaKnown RBP8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Slit1Q80TR4 1531 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Fbf1A2A870 1173 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Cfap157Q0VFX2 523 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 MyripQ8K3I4 856 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 GzmnQ920S1 248 aa8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 CactinQ9CS00 772 aaKnown RBP8.2□□□□□ -1.1
Chm-202ENSMUST00000113388 Kiaa1107Q80TK0 1369 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Cct5P80316 541 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Erc2Q6PH08 957 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Rbm5Q91YE7 815 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Erc1Q99MI1 1120 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Rrp15Q9CYX7 281 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Phkg2Q9DB30 406 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Cfap73J3QPZ5 306 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Actn3O88990 900 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Lmnb1P14733 588 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Ppp1r1bQ60829 194 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Tbl3Q8C4J7 801 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 ImmtQ8CAQ8 757 aaKnown RBP8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Syap1Q9D5V6 365 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Erbb3Q61526 1339 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Kcnh4A2A5F7 1018 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Nrg3O35181 713 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Rfc1P35601 1131 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Rnf216P58283 853 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Jakmip1Q8BVL9 626 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Elf2Q9JHC9 593 aa8.19□□□□□ -1.1
Chm-202ENSMUST00000113388 Simc1E9Q6E9 1354 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 4930523C07RikE9Q2T4 99 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Prim1P20664 417 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Hoxa2P31245 372 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Pim2Q62070 370 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ppp4r3aQ6P2K6 820 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Efcab8Q8C9R9 203 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Nat10Q8K224 1024 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Klhdc4Q921I2 584 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Nek4Q9Z1J2 792 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Nup153E9Q3G8 1462 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Tpx2A2APB8 745 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Lamb3Q61087 1168 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Brsk2Q69Z98 735 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 OscarQ8VBT3 265 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Mageb16Q9CWV4 363 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Akr1e2Q9DCT1 301 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Cacna1sQ02789 1880 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Phactr2B1AVP0 632 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc6D3YZP9 469 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ppp1r7Q3UM45 361 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 L1td1Q587J6 782 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Smg7Q5RJH6 1138 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ezh2Q61188 746 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ano6Q6P9J9 911 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 CtifQ6PEE2 600 aaKnown RBP8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Rnf168Q80XJ2 565 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Rps6kc1Q8BLK9 1056 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Ribc1Q9D0B8 379 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 TnmdQ9EP64 317 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Tulp1Q9Z273 543 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Snapc4Q8BP86 1333 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Becn2P0DM65 447 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Nkx2-3P97334 362 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Tex35Q14BK3 207 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Zfyve27Q3TXX3 415 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Msl1Q6PDM1 616 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Atp11cQ9QZW0 1129 aa8.18□□□□□ -1.1
Chm-202ENSMUST00000113388 Gbp6A0A0G2JDV3 611 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Gm43302L7N1X8 611 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Hnrnph1O35737 449 aaKnown RBP8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Arl13bQ640N2 427 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Cplx4Q80WM3 160 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Arhgap18Q8K0Q5 663 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Cog6Q8R3I3 657 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Ubxn4Q8VCH8 506 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Arhgap33Q80YF9 1305 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Evi5P97366 809 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Sap30bpQ02614 308 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 TchpQ3TVW5 497 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Gucy2cQ3UWA6 1072 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Ppm1fQ8CGA0 452 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Osbpl1aQ91XL9 950 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 2310002L09RikQ9D7L5 217 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Mad1l1Q9WTX8 717 aaKnown RBP8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Pnpla7A2AJ88 1352 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Klhl33G3UW92 533 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Pold1P52431 1105 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Dab2P98078 766 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc160Q3UYG1 323 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Tsga10Q6NY15 697 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Ccdc93Q7TQK5 629 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Ndufab1Q9CR21 156 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Atxn3Q9CVD2 355 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 KynuQ9CXF0 464 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Zbtb43Q9DAI4 467 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Cep85lA0A1W2P884 806 aa8.17□□□□□ -1.1
Chm-202ENSMUST00000113388 Zfpm1O35615 995 aa8.17□□□□□ -1.1
Retrieved 100 of 22,080 RNA–protein pairs in 27.5 ms