RNA–Protein interactions for RNA: ENSMUST00000111050.9

Bdnf-209, Transcript of Brain-derived neurotrophic factor, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Bdnf, Length 3,965 nt, Biotype protein coding, Subcellular localisation Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Bdnf-209ENSMUST00000111050 Ankrd40Q5SUE8 363 aa8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Gngt1Q61012 74 aa8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Cdc23Q8BGZ4 597 aa8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Edc3Q8K2D3 508 aaKnown RBP8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Mrpl44Q9CY73 333 aaKnown RBP8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Slc52a2Q9D8F3 450 aa8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Xrn1P97789 1719 aaKnown RBP8.72□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Map3k13Q1HKZ5 959 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Serpinb6Q60854 378 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ddx58Q6Q899 926 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Card14Q99KF0 999 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Mageb16Q9CWV4 363 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ccdc47Q9D024 483 aaKnown RBP8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Clic4Q9QYB1 253 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Uchl5Q9WUP7 329 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Tcof1O08784 1320 aaKnown RBP8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Irf6P97431 467 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Fam107bQ3TGF2 131 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Gas2l3Q3UWW6 683 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Usp13Q5BKP2 858 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ccdc82Q6PG04 518 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Znf653Q6YND2 615 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Zfp202Q8C879 641 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Rassf8Q8CJ96 419 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Nop2Q922K7 793 aaKnown RBP8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Ccdc39Q9D5Y1 937 aa8.71□□□□□ -1.01
Bdnf-209ENSMUST00000111050 Abca17E9PX95 1733 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Frmpd2A0A140LI67 1392 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Trim6Q8BGE7 488 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ppp4r3bQ922R5 820 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 TrdnE9Q9K5 693 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ugt1a6bK9J7B2 531 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Eif4a2P10630 407 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Atp8b1Q148W0 1251 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ugt1a6Q64435 531 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Naif1Q6PFD7 327 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ugt1a7cQ6ZQM8 531 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Nxf7Q80SZ6 620 aaKnown RBP8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Flad1Q8R123 492 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 TxlnbQ8VBT1 685 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ankrd1Q9CR42 319 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 CactinQ9CS00 772 aaKnown RBP8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Lztfl1Q9JHQ5 299 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Atp12aQ9Z1W8 1035 aa8.71□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Disp3A3KFU9 1347 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Irgm2A0A140LIF8 407 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 A0A1W2P6Q8 802 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gm9048A0A1W2P7H4 802 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 A0A1W2P7S8 802 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 A0A1W2P7Z8 802 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gm9046A0A1W2P855 802 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Dnajc21E9Q8D0 531 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 HalP35492 657 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tex11Q14AT2 947 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Fbxw10Q5SUS0 1030 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cdc5lQ6A068 802 aaKnown RBP8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Krt39Q6IFX4 482 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Rrp1bQ91YK2 724 aaKnown RBP8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tlr9Q9EQU3 1032 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tnip1Q9WUU8 647 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sycp1Q62209 993 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sdad1Q80UZ2 687 aaKnown RBP8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Kirrel3Q8BR86 778 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Hgh1Q8C3I8 393 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Prpf6Q91YR7 941 aaKnown RBP8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Zap70P43404 618 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Cep112Q5PR68 954 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Elf1Q60775 612 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Phf8Q80TJ7 1023 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Vps37cQ8R105 352 aa8.7□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Bbof1Q3V079 533 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Rec8Q8C5S7 591 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Trim66Q924W6 1242 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 MbipQ99LQ1 341 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 RabggtaQ9JHK4 567 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Kif13aQ9EQW7 1749 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Znf526Q8BI66 675 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pdcd6ipQ9WU78 869 aaKnown RBP8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Zfpm1O35615 995 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sstr3P30935 428 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Nf2P46662 596 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Tdo2P48776 406 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pfkfb1P70266 471 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Klra3Q64329 266 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Fsd1Q7TPM6 496 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Kif2bQ8C0N1 668 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Wdr60Q8C761 999 aa8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Mrps25Q9D125 171 aaKnown RBP8.69□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Myo1aO88329 1043 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Rad23aP54726 363 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Klra9Q2TJJ8 266 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Gnl3lQ6PGG6 577 aaKnown RBP8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Ccdc158Q8CDI6 1109 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Filip1Q9CS72 1211 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pes1Q9EQ61 584 aaKnown RBP8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Klra10Q9R1G6 266 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Pla2g4aP47713 748 aa8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Sptlc2P97363 560 aaKnown RBP8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 Eif3j1Q3UGC7 261 aaKnown RBP8.68□□□□□ -1.02
Bdnf-209ENSMUST00000111050 ItgadQ3V0T4 1168 aa8.68□□□□□ -1.02
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms