RNA–Protein interactions for RNA: ENSMUST00000053871.4

Ckap4-201, Transcript of Cytoskeleton-associated protein 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ckap4, Length 3,089 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ckap4-201ENSMUST00000053871 Snw1Q9CSN1 536 aaKnown RBP18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Gm973E9Q295 1059 aa18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 RdxP26043 583 aaKnown RBP18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Itga6Q61739 1091 aa18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 ImmtQ8CAQ8 757 aaKnown RBP18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Tsen34Q8BMZ5 316 aa18.68■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Phlpp1Q8CHE4 1687 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Znf326O88291 580 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Stx1aO35526 288 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Cplx1P63040 134 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Nxf2Q4ZGD8 691 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Odf2lQ9D478 642 aa18.67■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Oas2E9Q9A9 742 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Zbtb38Q3LR78 1197 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Mctp2Q5RJH2 878 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Ehd2Q8BH64 543 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Ric1Q69ZJ7 1422 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Dctn1O08788 1281 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Clec11aO88200 328 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Kif3aP28741 701 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Inpp5bQ8K337 993 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Mylk2Q8VCR8 613 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Grpel1Q99LP6 217 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Zbtb43Q9DAI4 467 aa18.66■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Pcdhb9E9Q5G2 828 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Trim34bJ3QNR8 485 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Tpcn2Q8BWC0 731 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Rps6ka5Q8C050 863 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Ppp4r3bQ922R5 820 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 FocadA2AKG8 1798 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Sik3Q6P4S6 1311 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Atp8a2P98200 1148 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Miga2Q8BK03 593 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Slx1bQ8BX32 270 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Popdc2Q9ES82 367 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Cdc45Q9Z1X9 566 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Crb1Q8VHS2 1405 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Cyp26a1O55127 497 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Dnm1P39053 867 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Gas2l3Q3UWW6 683 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Agtpbp1Q641K1 1218 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Pde3aQ9Z0X4 1141 aa18.65■□□□□ 0.58
Ckap4-201ENSMUST00000053871 Ubap1lG3UW59 384 aa18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Metap2O08663 478 aaKnown RBP18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Plcd3Q8K2J0 785 aa18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 IcoslgQ9JHJ8 322 aa18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Sptlc2P97363 560 aaKnown RBP18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Llgl2Q3TJ91 1027 aa18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tiam2Q6ZPF3 1715 aa18.64■□□□□ 0.57
Ckap4-201ENSMUST00000053871 CrcpO35427 148 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Rrp1P56183 494 aaKnown RBP18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Kiaa0754Q69ZZ9 979 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Kcnk13Q8R1P5 405 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Pde8bE9Q4S1 865 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tpm3P21107 285 aaKnown RBP18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tmem109Q3UBX0 243 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Slf2Q6P9P0 1278 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ano10Q8BH79 659 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Slu7Q8BHJ9 585 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Q8BT18 775 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Rapgef4Q9EQZ6 1011 aa18.63■□□□□ 0.57
Ckap4-201ENSMUST00000053871 XpcP51612 930 aa18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Jmjd4Q8BFT6 427 aa18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Luzp1Q8R4U7 1068 aaKnown RBP18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ces1dQ8VCT4 565 aa18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Zscan29E9Q5B4 869 aa18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Srek1Q8BZX4 494 aaKnown RBP18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Eaf2Q91ZD6 262 aa18.62■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Abl1P00520 1123 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Kdm3aQ6PCM1 1323 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Gm20425E9Q035 978 aaKnown RBP18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tnni2P13412 182 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 SrprbP47758 269 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Plcb3P51432 1234 aaKnown RBP18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Mrc1Q61830 1456 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ccz1Q8C1Y8 480 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Rec8Q8C5S7 591 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 9230110C19RikQ8CC70 267 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tlcd1Q99JT6 247 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Scn4aQ9ER60 1841 aa18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Acot9Q9R0X4 439 aaKnown RBP18.61■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Carmil3Q3UFQ8 1375 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 NapbP28663 298 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Sept1P42209 366 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Dhx40Q6PE54 779 aaKnown RBP18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Q8BZJ8 459 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ppil4Q9CXG3 492 aaKnown RBP18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Klhl34A2AI76 644 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Cdkn1cP49919 348 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Exoc5Q3TPX4 708 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Cdca8Q8BHX3 289 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Prl3d1P18121 224 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ift57Q8BXG3 429 aa18.6■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Tcof1O08784 1320 aaKnown RBP18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Zbtb7aO88939 569 aaKnown RBP18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Dnaaf2Q8BPI1 814 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Zfp202Q8C879 641 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Ufl1Q8CCJ3 793 aaKnown RBP18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Mical1Q8VDP3 1048 aa18.59■□□□□ 0.57
Ckap4-201ENSMUST00000053871 Riok1Q922Q2 567 aa18.59■□□□□ 0.57
Retrieved 100 of 22,080 RNA–protein pairs in 39.7 ms