RNA–Protein interactions for RNA: ENSMUST00000051408.7

Clrn1-201, Transcript of Clarin-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clrn1, Length 1,204 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1-201ENSMUST00000051408 Gja10Q9WUS4 505 aa13.01□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Zc3h4Q6ZPZ3 1304 aaKnown RBP13.01□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Disp3A3KFU9 1347 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Pik3r2O08908 722 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Hsp90ab1P11499 724 aaKnown RBP13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ccr5P51682 354 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 GmpsQ3THK7 693 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Foxn1Q61575 648 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Skor1Q8BX46 964 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ripk3Q9QZL0 486 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Tll2Q9WVM6 1012 aa13□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ttc41Q692V3 1318 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 FkbplO35450 347 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Fkbp1aP26883 108 aaKnown RBP12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Psmd1Q3TXS7 953 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Rc3h1Q4VGL6 1130 aaKnown RBP12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Tm4sf4Q91XD3 202 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Mkrn1Q9QXP6 481 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Sipa1l3G3X9J0 1776 aa12.99□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Prss12O08762 761 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 NefmP08553 848 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Glis3Q6XP49 780 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Kirrel2Q7TSU7 700 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Q7TT23 1179 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Rint1Q8BZ36 792 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Plekhg6Q8R0J1 787 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Lrp8Q924X6 996 aa12.98□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Msx1P13297 303 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Cxcl9P18340 126 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ankrd13cQ3UX43 541 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ctdspl2Q8BG15 465 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Ptrh1Q8BW00 204 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Celf2Q9Z0H4 508 aaKnown RBP12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 NynrinQ5DTZ0 1840 aa12.97□□□□□ -0.33
Clrn1-201ENSMUST00000051408 NfixP70257 488 aa12.96□□□□□ -0.33
Clrn1-201ENSMUST00000051408 RubcnQ80U62 956 aa12.96□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Tmem119Q8R138 280 aa12.96□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Fzd9Q9R216 592 aa12.96□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Tbc1d8Q9Z1A9 1134 aa12.96□□□□□ -0.33
Clrn1-201ENSMUST00000051408 Gm42688A0A0R3P9D1 673 aa12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Q3TQI7 289 aaKnown RBP12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 PsapQ61207 557 aaKnown RBP12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ankle2Q6P1H6 964 aa12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ccdc142Q8CAI1 738 aa12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ppp2r2dQ925E7 453 aa12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Gdf11Q9Z1W4 405 aa12.95□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Cavin4A2AMM0 362 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Epb42P49222 691 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Mansc4Q3UU94 337 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 EappQ5BU09 281 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 U2surpQ6NV83 1029 aaKnown RBP12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Swt1Q9DBQ9 907 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Gm42715A0A087WP63 3095 aaKnown RBP12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Plekhh1Q80TI1 1356 aa12.94□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Pax4P32115 349 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Cnot7Q60809 285 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Secisbp2lQ6A098 1086 aaKnown RBP12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Tmem130Q6NXM3 419 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ltb4r2Q9JJL9 360 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ankrd31A0A140LI88 1765 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ltn1Q6A009 1767 aa12.93□□□□□ -0.34
Clrn1-201ENSMUST00000051408 AfdnQ9QZQ1 1820 aaKnown RBP12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Col1a1P11087 1453 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Zmynd8A2A484 1235 aaKnown RBP12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Oas2E9Q9A9 742 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 CanxP35564 591 aaKnown RBP12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Zbtb40Q6PCS8 1258 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Sde2Q8K1J5 448 aaKnown RBP12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 GptQ8QZR5 496 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Fam174aQ9D3L0 190 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Kank1E9Q238 1360 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Dlg5E9Q9R9 1921 aa12.92□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Klhl34A2AI76 644 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Psmd14O35593 310 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Laptm5Q61168 261 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Podnl1Q6P3Y9 559 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Ascc2Q91WR3 749 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Popdc2Q9ES82 367 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Adarb2Q9JI20 745 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Mtmr1Q9Z2C4 669 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Scn11aQ9R053 1765 aa12.91□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Tmem67Q8BR76 992 aa12.9□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Rpgrip1lQ8CG73 1264 aa12.9□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Tfip11Q9ERA6 838 aaKnown RBP12.9□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Foxo4Q9WVH3 505 aa12.9□□□□□ -0.34
Clrn1-201ENSMUST00000051408 Lgr5Q9Z1P4 907 aa12.9□□□□□ -0.34
Clrn1-201ENSMUST00000051408 HunkO88866 714 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Cyp19a1P28649 503 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Nrg2P56974 756 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 NyxP83503 476 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 HlfQ8BW74 295 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Shtn1Q8K2Q9 631 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Sf3b3Q921M3 1217 aaKnown RBP12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Dydc2Q9D3X8 139 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Kcnq5Q9JK45 933 aa12.89□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Nrxn2E9Q7X7 1710 aa12.88□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Cops6O88545 324 aa12.88□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Myd88P22366 296 aa12.88□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Q3UJP5 209 aa12.88□□□□□ -0.35
Clrn1-201ENSMUST00000051408 Tpp2Q64514 1262 aa12.88□□□□□ -0.35
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms