RNA–Protein interactions for RNA: ENSMUST00000034868.13

Clk1-201, Transcript of Dual specificity protein kinase CLK1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Clk1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1-201ENSMUST00000034868 Tspan6O70401 245 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Vti1bO88384 232 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Scp2P32020 547 aaKnown RBP6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Nub1P54729 614 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Tbx3P70324 741 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Rftn1Q6A0D4 554 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Zfp251Q6PCX8 632 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Wnk4Q80UE6 1222 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Pnpla2Q8BJ56 486 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Clec4gQ8BNX1 294 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Usp20Q8C6M1 916 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Fam193aQ8CGI1 1231 aaKnown RBP6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Kiaa0319lQ8K135 1048 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Ppp4r3bQ922R5 820 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Ms4a4dQ99N05 225 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Add2Q9QYB8 725 aa6.29□□□□□ -1.4
Clk1-201ENSMUST00000034868 Cttnbp2B9EJA2 1648 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Prss51A0A286YDY8 319 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Gm13119B1ARV5 481 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Gm19402J3QJV4 266 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Eif6O55135 245 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Col9a2Q07643 688 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Ice2Q3UZ18 988 aaKnown RBP6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Ralbp1Q62172 648 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 CrkQ64010 304 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Ccdc154Q6RUT8 657 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Trim52Q8CDV4 233 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 AmotQ8VHG2 1126 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Prkag2Q91WG5 566 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 NaspQ99MD9 773 aaKnown RBP6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Phkg2Q9DB30 406 aa6.28□□□□□ -1.4
Clk1-201ENSMUST00000034868 Gm21680A0A0G2JGR8 267 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Enc1O35709 589 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Traf1P39428 409 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Rad52P43352 420 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Wnt10aP70701 417 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 ClasrpQ8CFC7 668 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Adgrg1Q8K209 687 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Champ1Q8K327 802 aaKnown RBP6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Wipi1Q8R3E3 446 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Hnrnpul1Q8VDM6 859 aaKnown RBP6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Alg1Q921Q3 482 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Lrp8Q924X6 996 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 LsrQ99KG5 594 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pes1Q9EQ61 584 aaKnown RBP6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Sumo3Q9Z172 110 aa6.27□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pramef25A2ASI9 494 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Capn5O08688 640 aaKnown RBP6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 SelpQ01102 768 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pnpla5Q32LZ8 432 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Vars2Q3U2A8 1060 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Cavin2Q63918 418 aaKnown RBP6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Dalrd3Q6PJN8 538 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 WtipQ7TQJ8 398 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Fbxo2Q80UW2 297 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gbp9Q8BTS3 619 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Fbxo33Q8VE08 562 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 QpctQ9CYK2 362 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Mrvi1Q9WUX5 899 aaKnown RBP6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Cecr2E9Q2Z1 1453 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pde4bB1AWC9 736 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gm10471E9Q1C7 252 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Hcn4O70507 1186 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Hps5P59438 1126 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Fam71bQ5STT6 665 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Spred3Q6P6N5 408 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 EngaseQ8BX80 734 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gnl3Q8CI11 538 aaKnown RBP6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Cyp2c70Q91W64 489 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Frmd4bQ920B0 1035 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ogfod3Q9D136 315 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gria4Q9Z2W8 902 aa6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Sart1Q9Z315 806 aaKnown RBP6.26□□□□□ -1.41
Clk1-201ENSMUST00000034868 Top2aQ01320 1528 aaKnown RBP6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ncapd3Q6ZQK0 1506 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Kdm5bQ80Y84 1544 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pfdn2O70591 154 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ms4a1P19437 291 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Bcl6P41183 707 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 HgsnatQ3UDW8 656 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Spout1Q3UHX9 385 aaKnown RBP6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Prpf38aQ4FK66 312 aaKnown RBP6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Grxcr1Q50H32 290 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Pou4f2Q63934 411 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ppp1r15bQ8BFW3 697 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Chit1Q9D7Q1 464 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ift22Q9DAI2 185 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Ehd4Q9EQP2 541 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 Prg4Q9JM99 1054 aa6.25□□□□□ -1.41
Clk1-201ENSMUST00000034868 PnisrA2AJT4 805 aaKnown RBP6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Sec14l5B2RXM5 696 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gm5878E9PUB3 99 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Diaph1O08808 1255 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Srpk2O54781 681 aaKnown RBP6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Gjb6P70689 261 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 PgrQ00175 926 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 ZufspQ3T9Z9 577 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Tbc1d32Q3URV1 1296 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Tmed1Q3V009 227 aa6.24□□□□□ -1.41
Clk1-201ENSMUST00000034868 Eif2b4Q61749 524 aa6.24□□□□□ -1.41
Retrieved 100 of 22,080 RNA–protein pairs in 18.4 ms