RNA–Protein interactions for RNA: ENSMUST00000027404.11

Ptprn-201, Transcript of Receptor-type tyrosine-protein phosphatase-like N, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptprn, Length 3,554 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptprn-201ENSMUST00000027404 Slc4a1P04919 929 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Acap3Q6NXL5 833 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Als2Q920R0 1651 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Pramel3A2AHA7 463 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Gm7903A2AWL1 463 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 AV320801A2AWL3 467 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Gm15023L7MUB4 467 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Rgs9O54828 675 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 RubcnlQ3TD16 648 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Col4a3bpQ9EQG9 624 aa18.6■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Cap2Q9CYT6 476 aa18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Sipa1l2Q80TE4 1722 aa18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Me1P06801 572 aa18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Prpf4bQ61136 1007 aaKnown RBP18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Zmynd15Q8C0R7 736 aa18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 BrapQ99MP8 591 aa18.59■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Lcmt1A0A0U1RNF2 332 aa18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Ccnl1Q52KE7 532 aaKnown RBP18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Ppp4r3aQ6P2K6 820 aa18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Zkscan8Q8BSL0 588 aa18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Gtpbp4Q99ME9 634 aaKnown RBP18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Fam213aQ9CYH2 218 aa18.58■□□□□ 0.57
Ptprn-201ENSMUST00000027404 Nfat5Q9WV30 1534 aa18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 XpcP51612 930 aa18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Gabpb2P81069 414 aa18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Nlrp1aQ2LKU9 1182 aa18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Ints5Q8CHT3 1018 aa18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Usp42B2RQC2 1324 aaKnown RBP18.58■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Nbr1P97432 988 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Mei4Q8BRM6 389 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Smim5Q8BT42 78 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Dnm3Q8BZ98 863 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Cnot6lQ8VEG6 555 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Mrvi1Q9WUX5 899 aaKnown RBP18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Scn7aB1AYL1 1681 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Dnm1P39053 867 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Magi2Q9WVQ1 1275 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Mon2Q80TL7 1715 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Kcna6Q61923 529 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 ApobrQ8VBT6 942 aa18.57■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Rrp1P56183 494 aaKnown RBP18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Srek1Q8BZX4 494 aaKnown RBP18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Emilin1Q99K41 1017 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Adamtsl3G3UXC7 1706 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Bag1Q60739 355 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Lonp2Q9DBN5 852 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Diaph1O08808 1255 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Smarcc2Q6PDG5 1213 aa18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Nip7Q9CXK8 180 aaKnown RBP18.56■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Abl1P00520 1123 aa18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Exosc10P56960 887 aaKnown RBP18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 CoblQ5NBX1 1337 aaKnown RBP18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Asap2Q7SIG6 958 aa18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 TrdnE9Q9K5 693 aa18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Sptlc2P97363 560 aaKnown RBP18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Lamb3Q61087 1168 aa18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Dhx40Q6PE54 779 aaKnown RBP18.55■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Maats1Q8BRC6 783 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Gng11P61953 73 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Q66JV7 365 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Znf653Q6YND2 615 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Atad2Q8CDM1 1040 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Arl8aQ8VEH3 186 aa18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Acot9Q9R0X4 439 aaKnown RBP18.54■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Jakmip2D3YXK0 820 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Gpr182P43142 395 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Klhl34A2AI76 644 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Ttll12Q3UDE2 639 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Pram1Q6BCL1 675 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Tmco3Q8BH01 678 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Rdm1Q9CQK3 281 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Prl3d2F6R3P9 224 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Surf1P09925 306 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Washc4Q3UMB9 1173 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Cdca8Q8BHX3 289 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Tmem266Q8BZB3 538 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Abcb6Q9DC29 842 aa18.53■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Ftl2P49945 183 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Rtel1Q0VGM9 1203 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Gtf2f1Q3THK3 508 aaKnown RBP18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Cep120Q7TSG1 988 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Ubn2Q80WC1 1314 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Znf326O88291 580 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Pla2g4fQ50L41 855 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Zfp202Q8C879 641 aa18.52■□□□□ 0.56
Ptprn-201ENSMUST00000027404 Pcdh10E9PXQ7 1057 aa18.52■□□□□ 0.55
Ptprn-201ENSMUST00000027404 TsksO54887 585 aa18.52■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Atp12aQ9Z1W8 1035 aa18.52■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Lipo1J3QME6 396 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Ankrd40Q5SUE8 363 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Agtpbp1Q641K1 1218 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Tpm4Q6IRU2 248 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Tmem59lQ7TNI2 337 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Fam76aQ922G2 307 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Tcof1O08784 1320 aaKnown RBP18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Arap3Q8R5G7 1538 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 AK157302I3ITR1 129 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Isca1Q9D924 129 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Large1Q9Z1M7 756 aa18.51■□□□□ 0.55
Ptprn-201ENSMUST00000027404 Cdc45Q9Z1X9 566 aa18.51■□□□□ 0.55
Retrieved 100 of 22,080 RNA–protein pairs in 17.8 ms