RNA–Protein interactions for RNA: ENST00000640957.1

SCARB2-227, Transcript of scavenger receptor class B member 2, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCARB2, Length 3,255 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-227ENST00000640957 MSL2Q9HCI7 577 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 KLHL13Q9P2N7 655 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 COPS7AQ9UBW8 275 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 C2orf16Q68DN1 1984 aa11.97□□□□□ -0.49
SCARB2-227ENST00000640957 CEP250Q9BV73 2442 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 TMEM50AO95807 157 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 IGHV4-34P06331 123 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 VAMP2P63027 116 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 TMEM187Q14656 261 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 TDRG1Q3Y452 100 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 DMRTA1Q5VZB9 504 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 TCEAL6Q6IPX3 200 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 PCGF1Q9BSM1 259 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 TUBD1Q9UJT1 453 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 C9orf40Q8IXQ3 194 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 FBXL14Q8N1E6 418 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 M1APQ8TC57 530 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 ASB10Q8WXI3 467 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 ANXA10Q9UJ72 324 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 PIGLQ9Y2B2 252 aa11.96□□□□□ -0.49
SCARB2-227ENST00000640957 ASPMQ8IZT6 3477 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 A0A0U1RQK1 487 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 PAX5Q02548 391 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 UEVLDQ8IX04 471 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 HOXB13Q92826 284 aaPredicted RBP11.96□□□□□ -0.5
SCARB2-227ENST00000640957 NAA60Q9H7X0 242 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 CUTCQ9NTM9 273 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 TP53TG5Q9Y2B4 290 aa11.96□□□□□ -0.5
SCARB2-227ENST00000640957 CNOT1A5YKK6 2376 aaKnown RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF814B7Z6K7 855 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 PROB1E7EW31 1015 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 ADAM20O43506 726 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 POLR2HP52434 150 aaKnown RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 RPS18P62269 152 aaKnown RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 H3F3AP84243 136 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 KIAA0895LQ68EN5 471 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 UBE2J1Q9Y385 318 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 STRAPQ9Y3F4 350 aaKnown RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 PTPRSQ13332 1948 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 DMDP11532 3685 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 GUSBP08236 651 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 PATE4P0C8F1 98 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 DUSP1P28562 367 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 GNRHRP30968 328 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 MTCP1P56278 107 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 TRA2AQ13595 282 aaKnown RBP eCLIP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 JOSD1Q15040 202 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 KDF1Q8NAX2 398 aaPredicted RBP11.95□□□□□ -0.5
SCARB2-227ENST00000640957 SLC38A9Q8NBW4 561 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 UBALD1Q8TB05 177 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 IL22RA2Q969J5 263 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 BOD1Q96IK1 185 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 RALGAPA1Q6GYQ0 2036 aa11.95□□□□□ -0.5
SCARB2-227ENST00000640957 IGHV3-15A0A0B4J1V0 119 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 HSPB2A8KAH6 182 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 CLDN34H7C241 214 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 EGR1P18146 543 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 GZMHP20718 246 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 NKX2-1P43699 371 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-227ENST00000640957 FAM3BP58499 235 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-227ENST00000640957 GABREP78334 506 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 HSPB2Q16082 182 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 SSX7Q7RTT5 188 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 P4HTMQ9NXG6 502 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 A0A1B0GWJ7 208 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 UCP3P55916 312 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 TMPRSS7Q7RTY8 843 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 TMEM252Q8N6L7 170 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 CLDND2Q8NHS1 167 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 KCNK17Q96T54 332 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 TRAPPC6AO75865 159 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 DNM1P34Q6PK57 102 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 H1FNTQ75WM6 255 aaPredicted RBP11.94□□□□□ -0.5
SCARB2-227ENST00000640957 DTD1Q8TEA8 209 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 SDSLQ96GA7 329 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 FSCN3Q9NQT6 498 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 SEMA5BQ9P283 1151 aa11.94□□□□□ -0.5
SCARB2-227ENST00000640957 ELOA3CA0A087WX78 387 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-227ENST00000640957 CHST1O43916 411 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 CTSDP07339 412 aaPredicted RBP11.93□□□□□ -0.5
SCARB2-227ENST00000640957 IAPPP10997 89 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 UCP2P55851 309 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 HSD11B2P80365 405 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 MRPS21P82921 87 aaKnown RBP11.93□□□□□ -0.5
SCARB2-227ENST00000640957 FOXF1Q12946 379 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 IL22RA1Q8N6P7 574 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 OR1K1Q8NGR3 316 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 OR1P1Q8NH06 330 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 GATAD1Q8WUU5 269 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 LYZL4Q96KX0 146 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 MMP17Q9ULZ9 603 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 HNF1AP20823 631 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 AADACP22760 399 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 LIAT1Q6ZQX7 453 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 C16orf82Q7Z2V1 217 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 TMEM208Q9BTX3 173 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 ARV1Q9H2C2 271 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 ZNF160Q9HCG1 818 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 DCHS1Q96JQ0 3298 aa11.93□□□□□ -0.5
SCARB2-227ENST00000640957 CEACAM18A8MTB9 384 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms