RNA–Protein interactions for RNA: ENST00000635152.1

BRF1-222, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,876 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-222ENST00000635152 CBLN2Q8IUK8 224 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 GALNT14Q96FL9 552 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 SYT3Q9BQG1 590 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 UQCC1Q9NVA1 299 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 MTCH1Q9NZJ7 389 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 ZFHX4Q86UP3 3567 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 SYNGR1O43759 233 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 LILRA1O75019 489 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 SCTP09683 121 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 EIF5AP63241 154 aaKnown RBP11.25□□□□□ -0.61
BRF1-222ENST00000635152 HIKESHIQ53FT3 197 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 TMEM211Q6ICI0 200 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 EIF5AL1Q6IS14 154 aaKnown RBP11.25□□□□□ -0.61
BRF1-222ENST00000635152 MCEMP1Q8IX19 187 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 ZDHHC23Q8IYP9 409 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 SLC35G3Q8N808 338 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 SUMF1Q8NBK3 374 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 MSI2Q96DH6 328 aaKnown RBP11.25□□□□□ -0.61
BRF1-222ENST00000635152 DEFB127Q9H1M4 99 aa11.25□□□□□ -0.61
BRF1-222ENST00000635152 EP300Q09472 2414 aaPredicted RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 PQLC2LA1A4F0 135 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 CD59P13987 128 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 TMEM268Q5VZI3 342 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 Q6ZRG5 221 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 SMIM8Q96KF7 97 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 TECTBQ96PL2 329 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 SUCNR1Q9BXA5 334 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 PRSS50Q9UI38 385 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 LIPGQ9Y5X9 500 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 TTC28Q96AY4 2481 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 DSPP15924 2871 aaKnown RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 MED19A0JLT2 244 aaPredicted RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 SLC33A1O00400 549 aaPredicted RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 JTBO76095 146 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 MEOX1P50221 254 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 NHLH2Q02577 135 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 SPATA46Q5T0L3 261 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 HAGHLQ6PII5 290 aaPredicted RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 LGI3Q8N145 548 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 IL22RA1Q8N6P7 574 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 CLRN3Q8NCR9 226 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 APOBEC3DQ96AK3 386 aaPredicted RBP11.24□□□□□ -0.61
BRF1-222ENST00000635152 GPR87Q9BY21 358 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 LINC00470Q9BZP3 86 aa11.24□□□□□ -0.61
BRF1-222ENST00000635152 E5RGE8 158 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 TNFSF15O95150 251 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 ZNF883P0CG24 379 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 SP9P0CG40 484 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 CD80P33681 288 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 POLR2GP62487 172 aaKnown RBP eCLIP11.23□□□□□ -0.61
BRF1-222ENST00000635152 NRN1LQ496H8 165 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 COL27A1Q8IZC6 1860 aaPredicted RBP11.23□□□□□ -0.61
BRF1-222ENST00000635152 C18orf12Q96KH6 178 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 C12orf57Q99622 126 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 NSG2Q9Y328 171 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 LAMA5O15230 3695 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 CACNA1HO95180 2353 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 C3orf85A0A1B0GTC6 90 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 TRAPPC2LH3BP13 241 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 RPL36A-HNRNPH2H7BZ11 118 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 CDX4O14627 284 aaPredicted RBP11.23□□□□□ -0.61
BRF1-222ENST00000635152 HS3ST1O14792 307 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 MT-CO3P00414 261 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 GNRHRP30968 328 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 SWI5Q1ZZU3 235 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 CEACAM21Q3KPI0 293 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 AKIRIN2Q53H80 203 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.23□□□□□ -0.61
BRF1-222ENST00000635152 C17orf78Q8N4C9 275 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 HIST1H2AAQ96QV6 131 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 BOD1L1Q8NFC6 3051 aa11.23□□□□□ -0.61
BRF1-222ENST00000635152 IGHV3-64DA0A0J9YX35 117 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 MPPED1O15442 326 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 TNFSF12O43508 249 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 NXPH3O95157 252 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 OR8U9P0C7N5 309 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 NPBWR1P48145 328 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 FHITP49789 147 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 SULT1A2P50226 295 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 CAV2P51636 162 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 PLP2Q04941 152 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 IL34Q6ZMJ4 242 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 OR8U1Q8NH10 309 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 RDH5Q92781 318 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 SAT2Q96F10 170 aaPredicted RBP11.22□□□□□ -0.61
BRF1-222ENST00000635152 WFDC1Q9HC57 220 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 ZDHHC8Q9ULC8 765 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 PRELID3BQ9Y3B1 194 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 CD300LBA8K4G0 201 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 C21orf140B9A014 251 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 H7C1Q1 480 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 C1QL1O75973 258 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 TK1P04183 234 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 FGF12P61328 243 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 ZNF616Q08AN1 781 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 ZNF818PQ6ZRF7 136 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 CCDC71LQ8N9Z2 235 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 HSD17B11Q8NBQ5 300 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 POM121L2Q96KW2 1035 aa11.22□□□□□ -0.61
BRF1-222ENST00000635152 NRIP2Q9BQI9 281 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.2 ms