RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 FOXI3A8MTJ6 420 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 PPIAL4DF5H284 164 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 C3orf80F5H4A9 247 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 LGALS8O00214 317 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 GEMIN2O14893 280 aaKnown RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 XRCC3O43542 346 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 NDUFS7O75251 213 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 PPIAL4FP0DN26 164 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 MUC1P15941 1255 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 GABRR1P24046 479 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 CD80P33681 288 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 VEGFCP49767 419 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 SNU13P55769 128 aaKnown RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 HOXA4Q00056 320 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 DYRK1AQ13627 763 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 CARTPTQ16568 116 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 ATAD3CQ5T2N8 411 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 OR10R2Q8NGX6 335 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 SMIM4Q8WVI0 70 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 ST6GAL2Q96JF0 529 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 IFT22Q9H7X7 185 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 CHODLQ9H9P2 273 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 BARX1Q9HBU1 254 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 MYOZ1Q9NP98 299 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 WIPI2Q9Y4P8 454 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 PPIAL4AQ9Y536 164 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 NSD1Q96L73 2696 aaPredicted RBP10.82□□□□□ -0.68
SPG7-209ENST00000564047 ARFGEF3Q5TH69 2177 aa10.82□□□□□ -0.68
SPG7-209ENST00000564047 TRAV38-1A0A0B4J264 116 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 OR2AT4A6NND4 320 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 LYNX1G3V0Z9 82 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 SH2D1BO14796 132 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 SOCS1O15524 211 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 OR7C1O76099 320 aaPredicted RBP10.81□□□□□ -0.68
SPG7-209ENST00000564047 LY6HO94772 140 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 IGHV4-39P01824 125 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 LYNX1P0DP58 116 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 PSG2P11465 335 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 CDK2P24941 298 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 DUSP1P28562 367 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 BLVRBP30043 206 aaPredicted RBP10.81□□□□□ -0.68
SPG7-209ENST00000564047 RBMXP38159 391 aaKnown RBP10.81□□□□□ -0.68
SPG7-209ENST00000564047 TMEM50BP56557 158 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 TMEM33P57088 247 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 RAB25P57735 213 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 IKZF1Q13422 519 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 ARL6IP1Q15041 203 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 KCNJ8Q15842 424 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 MICBQ29980 383 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 MOGAT2Q3SYC2 334 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 PLA1AQ53H76 456 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 TMEM69Q5SWH9 247 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 FAM201AQ5SY85 155 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 Q6P435 159 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 PEG10Q86TG7 708 aaKnown RBP10.81□□□□□ -0.68
SPG7-209ENST00000564047 NRGNQ92686 78 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 RAB3CQ96E17 227 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 SEH1LQ96EE3 360 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 FAM210AQ96ND0 272 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 GSX2Q9BZM3 304 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 DPAGT1Q9H3H5 408 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 SPACA1Q9HBV2 294 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 RCC2Q9P258 522 aaKnown RBP10.81□□□□□ -0.68
SPG7-209ENST00000564047 HSF4Q9ULV5 492 aa10.81□□□□□ -0.68
SPG7-209ENST00000564047 IGKV1D-17A0A075B6S4 117 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TRAV18A0A075B6X5 111 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 IGHV3OR15-7A0A075B7D8 119 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 A0A0B4J293 547 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 NAP1L6A6NFF2 107 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 RFPL4AA6NLU0 287 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 RFPL4AL1F8VTS6 287 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 INMT-MINDY4F8WBC2 141 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 DEGS1O15121 323 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 LANCL1O43813 399 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 PDCD6O75340 191 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 ECDO95905 644 aaPredicted RBP10.8□□□□□ -0.68
SPG7-209ENST00000564047 HAND1O96004 215 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 GLAP06280 429 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 ZNF44P15621 663 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 FUT3P21217 361 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 LMO1P25800 156 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 CHATP28329 748 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 PRDX2P32119 198 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 PTH2RP49190 550 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 RAG2P55895 527 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TAS2R20P59543 309 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 MADCAM1Q13477 382 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TATDN3Q17R31 274 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 STUMQ69YW2 141 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 SFRP4Q6FHJ7 346 aaPredicted RBP10.8□□□□□ -0.68
SPG7-209ENST00000564047 SIGIRRQ6IA17 410 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 Q6ZTK2 550 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TCTE3Q8IZS6 198 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TOMM5Q8N4H5 51 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 CHST4Q8NCG5 386 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 ANGPTL6Q8NI99 470 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 DEDD2Q8WXF8 326 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 RAB1CQ92928 201 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 UPRTQ96BW1 309 aa10.8□□□□□ -0.68
SPG7-209ENST00000564047 TIMD4Q96H15 378 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 892.8 ms