RNA–Protein interactions for RNA: ENST00000493829.5

USP39-218, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 2

Gene USP39, Length 1,660 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-218ENST00000493829 RPS2P15880 293 aaKnown RBP16.15■□□□□ 0.18
USP39-218ENST00000493829 EDDM3AQ14507 147 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 KCNJ8Q15842 424 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 CLEC12BQ2HXU8 276 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 Q5PR19 223 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 ZNF788Q6ZQV5 615 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 DCDC5Q6ZRR9 648 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 OR4S1Q8NGB4 309 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 C10orf105Q8TEF2 133 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 NINJ1Q92982 152 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 CTSZQ9UBR2 303 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 KCNK7Q9Y2U2 307 aa16.15■□□□□ 0.18
USP39-218ENST00000493829 MCRIP1C9JLW8 97 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 MFNGO00587 321 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 CSF3P09919 207 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 GIFP27352 417 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 MNDAP41218 407 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 OR3A1P47881 315 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 IL13RA1P78552 427 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 C17orf107Q6ZR85 190 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 NUDCD2Q8WVJ2 157 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 MBD6Q96DN6 1003 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 SDSLQ96GA7 329 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 HDHD3Q9BSH5 251 aaPredicted RBP16.14■□□□□ 0.18
USP39-218ENST00000493829 IFT22Q9H7X7 185 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 SPACA1Q9HBV2 294 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 AKIP1Q9NQ31 210 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 AK3Q9UIJ7 227 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 PCDHB10Q9UN67 800 aa16.14■□□□□ 0.18
USP39-218ENST00000493829 NAV2Q8IVL1 2488 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 ARID1AO14497 2285 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 A0A0A6YYH2 397 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 A6NJ64 397 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 SIGLEC5O15389 551 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 ZNF737O75373 536 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 GUCA2AQ02747 115 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 GRK1Q15835 563 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 ZNF260Q3ZCT1 412 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 SLC36A1Q7Z2H8 476 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 MFSD4AQ8N468 514 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 ZNF561Q8N587 486 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 SPICQ8N5J4 248 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 PLPPR1Q8TBJ4 325 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 TSC22D3Q99576 134 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 AUNIPQ9H7T9 357 aa16.14■□□□□ 0.17
USP39-218ENST00000493829 MEX3AA1L020 520 aaKnown RBP16.13■□□□□ 0.17
USP39-218ENST00000493829 MEIS3P1A6NDR6 274 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 FCER2P06734 321 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 ARFRP1Q13795 201 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 LRRC75A-AS1Q8N1F1 130 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 TPRX1Q8N7U7 411 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 ABHD1Q96SE0 405 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 ETAA1Q9NY74 926 aa16.13■□□□□ 0.17
USP39-218ENST00000493829 TNFRSF13BO14836 293 aaPredicted RBP16.12■□□□□ 0.17
USP39-218ENST00000493829 HLA-DQB1P01920 261 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 NDUFB7P17568 137 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 LMO1P25800 156 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 NR4A2P43354 598 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 SEC61A1P61619 476 aaKnown RBP16.12■□□□□ 0.17
USP39-218ENST00000493829 LSAMPQ13449 338 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 ZNF79Q15937 498 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 TMEM155Q4W5P6 130 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 PYDC2Q56P42 97 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 BAIAP2L2Q6UXY1 529 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 ST8SIA4Q92187 359 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 NUDT16L1Q9BRJ7 211 aaKnown RBP16.12■□□□□ 0.17
USP39-218ENST00000493829 SHARPINQ9H0F6 387 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 HSF4Q9ULV5 492 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 ITPR2Q14571 2701 aa16.12■□□□□ 0.17
USP39-218ENST00000493829 MEIOCA2RUB1 952 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 NDUFS8O00217 210 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 DVL1O14640 695 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 FCN3O75636 299 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 TK1P04183 234 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 EDDM3BP56851 147 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 GNG2P59768 71 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 AESQ08117 197 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 ATPAF1Q5TC12 328 aaPredicted RBP16.11■□□□□ 0.17
USP39-218ENST00000493829 OR8H2Q8N162 312 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 POM121Q96HA1 1249 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 MED30Q96HR3 178 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 SNX22Q96L94 193 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 DNTTIP1Q9H147 329 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 CHMP1AQ9HD42 196 aaPredicted RBP16.11■□□□□ 0.17
USP39-218ENST00000493829 SLC25A10Q9UBX3 287 aaPredicted RBP16.11■□□□□ 0.17
USP39-218ENST00000493829 PDZD2O15018 2839 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 BAHCC1Q9P281 2608 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 K7N7A8 449 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 NDUFB3O43676 98 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 NDUFA2O43678 99 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 FSTL3O95633 263 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 GSTP1P09211 210 aaKnown RBP16.11■□□□□ 0.17
USP39-218ENST00000493829 RBM39Q14498 530 aaKnown RBP16.11■□□□□ 0.17
USP39-218ENST00000493829 HACD4Q5VWC8 232 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 PYHIN1Q6K0P9 492 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 DNM1P46Q6ZS02 220 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 OR8B3Q8NGG8 313 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 CLDND2Q8NHS1 167 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 SETD6Q8TBK2 473 aa16.11■□□□□ 0.17
USP39-218ENST00000493829 OR8B2Q96RD0 313 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 171 ms