RNA–Protein interactions for RNA: ENST00000493456.5

NUP50-218, Transcript of nucleoporin 50, humanhuman

TSL 3

Gene NUP50, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-218ENST00000493456 MAGEB4O15481 346 aaPredicted RBP13.9□□□□□ -0.18
NUP50-218ENST00000493456 POU3F4P49335 361 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 SNU13P55769 128 aaKnown RBP13.9□□□□□ -0.18
NUP50-218ENST00000493456 ODF4Q2M2E3 257 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 MEPCEQ7L2J0 689 aaKnown RBP13.9□□□□□ -0.18
NUP50-218ENST00000493456 CATSPERDQ86XM0 798 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 PP6455Q8WZ26 134 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 LRGUKQ96M69 825 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 PRRG3Q9BZD7 231 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 DCLRE1BQ9H816 532 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 ADGRL4Q9HBW9 690 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 HMG20AQ9NP66 347 aa13.9□□□□□ -0.18
NUP50-218ENST00000493456 ZNF256Q9Y2P7 627 aaPredicted RBP13.9□□□□□ -0.18
NUP50-218ENST00000493456 SIRT4Q9Y6E7 314 aaPredicted RBP13.9□□□□□ -0.18
NUP50-218ENST00000493456 SEC14L6B5MCN3 397 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 RPP14O95059 124 aaKnown RBP13.89□□□□□ -0.19
NUP50-218ENST00000493456 KRT8P05787 483 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 MS4A2Q01362 244 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 AESQ08117 197 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 KIR2DS1Q14954 304 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 DRAM1Q8N682 238 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 DNAJC9Q8WXX5 260 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 HRASLS5Q96KN8 279 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 RCHY1Q96PM5 261 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 ADI1Q9BV57 179 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 GON7Q9BXV9 100 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 COMMD4Q9H0A8 199 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 KRT84Q9NSB2 600 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 OR6C3Q9NZP0 311 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 GSTK1Q9Y2Q3 226 aa13.89□□□□□ -0.19
NUP50-218ENST00000493456 LCE6AA0A183 80 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 A0A1W2PPI3 338 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 H3BSH0 61 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 AP4M1O00189 453 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 LYL1P12980 280 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 HOXB6P17509 224 aaKnown RBP13.88□□□□□ -0.19
NUP50-218ENST00000493456 NFYBP25208 207 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 CDX1P47902 265 aaPredicted RBP13.88□□□□□ -0.19
NUP50-218ENST00000493456 RAB7AP51149 207 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 MTCP1P56278 107 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 MADCAM1Q13477 382 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 PNLIPRP3Q17RR3 467 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 C17orf58Q2M2W7 97 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 DEFB136Q30KP8 78 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 CXorf66Q5JRM2 361 aaPredicted RBP13.88□□□□□ -0.19
NUP50-218ENST00000493456 KRBOX4Q5JUW0 171 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 LHFPL2Q6ZUX7 228 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 HS3ST5Q8IZT8 346 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 OR8H3Q8N146 312 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 YIPF7Q8N8F6 280 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 CHST4Q8NCG5 386 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 ASB9Q96DX5 294 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 KIRREL1Q96J84 757 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 MED4Q9NPJ6 270 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 H2AFY2Q9P0M6 372 aaPredicted RBP13.88□□□□□ -0.19
NUP50-218ENST00000493456 SCOCQ9UIL1 159 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 SMAD5-AS1Q9Y6J3 95 aa13.88□□□□□ -0.19
NUP50-218ENST00000493456 KBTBD11-OT1A0A1B0GTJ5 212 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 J3QR06 171 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 PRKYO43930 277 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 IGKV1D-33P01593 117 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 IGKV1-33P01594 117 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 RPLP1P05386 114 aaKnown RBP13.87□□□□□ -0.19
NUP50-218ENST00000493456 CALCBP10092 127 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 ZNF44P15621 663 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 PRKACBP22694 351 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 CRISP1P54107 249 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 PDZK1IP1Q13113 114 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 NXNL2Q5VZ03 156 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 LCNL1Q6ZST4 164 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 ADGRG5Q8IZF4 528 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 RNF152Q8N8N0 203 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 COQ2Q96H96 371 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 RHOFQ9HBH0 211 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 PALMDQ9NP74 551 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 ZNF446Q9NWS9 450 aa13.87□□□□□ -0.19
NUP50-218ENST00000493456 LOC107986453A0A1B0GWG9 222 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 DCTN3O75935 186 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 UBCP0CG48 685 aaKnown RBP13.86□□□□□ -0.19
NUP50-218ENST00000493456 PRKACGP22612 351 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 INSL3P51460 131 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 BNIP1Q12981 228 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 FOXE3Q13461 319 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 HNF4GQ14541 408 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 KIAA2026Q5HYC2 2103 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 UTF1Q5T230 341 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 HAVCR2Q8TDQ0 301 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 SPSB1Q96BD6 273 aa13.86□□□□□ -0.19
NUP50-218ENST00000493456 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 CCRL2O00421 344 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 KDM4BO94953 1096 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 ELANEP08246 267 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 GPR12P47775 334 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 GPR50Q13585 617 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 FHL3Q13643 280 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 ATXN7L3Q14CW9 347 aaPredicted RBP13.85□□□□□ -0.19
NUP50-218ENST00000493456 PTGES3Q15185 160 aaKnown RBP13.85□□□□□ -0.19
NUP50-218ENST00000493456 ZNF260Q3ZCT1 412 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 AADACL4Q5VUY2 407 aa13.85□□□□□ -0.19
NUP50-218ENST00000493456 UTS2BQ765I0 119 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 76.4 ms