RNA–Protein interactions for RNA: ENST00000480525.5

HDAC6-223, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 412 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-223ENST00000480525 SMAD7O15105 426 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 OR2H2O95918 312 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 GYPAP02724 150 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 HSMCR30P0CW71 290 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 CGB3P0DN86 165 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 CGB7P0DN87 165 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 HOXB4P17483 251 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SRD5A1P18405 259 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 RAB3BP20337 219 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 BCL3P20749 454 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 FUT3P21217 361 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 MYL9P24844 172 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 FPR2P25090 351 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 CALRP27797 417 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 OR3A1P47881 315 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 NPBWR2P48146 333 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SOX2P48431 317 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 POU3F4P49335 361 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 DYNLT3P51808 116 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 UBE2E1P51965 193 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 DLX6P56179 175 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 P2RX3P56373 397 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 HILS1P60008 231 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SEC61A1P61619 476 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 RPS25P62851 125 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 RPS27AP62979 156 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 COL10A1Q03692 680 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SFRP4Q6FHJ7 346 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SLC35E4Q6ICL7 350 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 RAB12Q6IQ22 244 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 LYPD2Q6UXB3 125 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 Q6ZS49 121 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 C1orf229Q6ZS94 237 aaPredicted RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 BTN2A1Q7KYR7 527 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 GDPD3Q7L5L3 318 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 MOB1BQ7L9L4 216 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 LDLRAD3Q86YD5 345 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 C11orf42Q8N5U0 333 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 FAM216BQ8N7L0 139 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 ZNF565Q8N9K5 539 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 ZNRF1Q8ND25 227 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 OR11H6Q8NGC7 330 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 OR4D6Q8NGJ1 314 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 OR13F1Q8NGS4 319 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 TRMT10AQ8TBZ6 339 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 ZNF596Q8TC21 504 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SLAMF9Q96A28 289 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SLC25A28Q96A46 364 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 YIPF6Q96EC8 236 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 CCL13Q99616 98 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 URM1Q9BTM9 101 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 TMED9Q9BVK6 235 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 SUCNR1Q9BXA5 334 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 BEX2Q9BXY8 128 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 PPIL3Q9H2H8 161 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 C7orf69Q9H7B7 122 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 HEXA-AS1Q9H8Q6 139 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 YAE1D1Q9NRH1 226 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 MBNL3Q9NUK0 354 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 TXNL4BQ9NX01 149 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 STEAP1Q9UHE8 339 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 NUP50Q9UKX7 468 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 ST3GAL6Q9Y274 331 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 MRPS28Q9Y2Q9 187 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 TBL2Q9Y4P3 447 aaKnown RBP4.19□□□□□ -1.74
HDAC6-223ENST00000480525 ETV7Q9Y603 341 aa4.19□□□□□ -1.74
HDAC6-223ENST00000480525 TRGV10A0A0A0MS01 117 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 TRAV24A0A0B4J272 114 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 TMEM82A0PJX8 343 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ODAMA1E959 279 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 A6NIN4 97 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 SERPINE3A8MV23 424 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 INAFM1C9JVW0 142 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 PHF1O43189 567 aaPredicted RBP4.18□□□□□ -1.74
HDAC6-223ENST00000480525 SPRY1O43609 319 aaPredicted RBP4.18□□□□□ -1.74
HDAC6-223ENST00000480525 PSPNO60542 156 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 PDCD6O75340 191 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 CLPXO76031 633 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 TOX4O94842 621 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 GABARAPO95166 117 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 NAPSAO96009 420 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ZNF728P0DKX0 622 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 VSIG8P0DPA2 414 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ARSBP15848 533 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 MGMTP16455 207 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 CD36P16671 472 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 PRKACAP17612 351 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 PSMB9P28065 219 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 GLP1RP43220 463 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 MAP2K4P45985 399 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 OR3A4PP47883 348 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ALDH3B2P48448 385 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ZNF137PP52743 207 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 TMBIM6P55061 237 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 ERVFRD-1P60508 538 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 LCN2P80188 198 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 FAM201AQ5SY85 155 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 MINOS1Q5TGZ0 78 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 GPR157Q5UAW9 335 aa4.18□□□□□ -1.74
HDAC6-223ENST00000480525 RSBN1Q5VWQ0 802 aaPredicted RBP4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms