RNA–Protein interactions for RNA: ENST00000439613.2

HMGB1P37-201, Transcript of high mobility group box 1 pseudogene 37, humanhuman

BASIC

Gene HMGB1P37, Length 609 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P37-201ENST00000439613 NRIP2Q9BQI9 281 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ALX4Q9H161 411 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 TLNRD1Q9H1K6 362 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 MMP28Q9H239 520 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF442Q9H7R0 627 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZMAT3Q9HA38 289 aaKnown RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SEBOXQ9HB31 216 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 GPN1Q9HCN4 374 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 MYOZ1Q9NP98 299 aaPredicted RBP3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 NUDT15Q9NV35 164 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLC2A8Q9NY64 477 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 RASL12Q9NYN1 266 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 MTCH1Q9NZJ7 389 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ANAPC10Q9UM13 185 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 ROS1P08922 2347 aa3.37□□□□□ -1.87
HMGB1P37-201ENST00000439613 CHD3Q12873 2000 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CACNA1BQ00975 2339 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TRAV6A0A075B6T7 132 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 A0A1W2PP11 408 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 C7orf66A4D0T2 115 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 MEIS3P1A6NDR6 274 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 DPRXA6NFQ7 191 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 WIPF3A6NGB9 483 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SNRPGP15A8MWD9 76 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ATP6V1G2-DDX39BF2Z307 99 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 IFNL4K9M1U5 179 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ABCD4O14678 606 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CDIPTO14735 213 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 DEGS1O15121 323 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 MLNRO43193 412 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SYNGR1O43759 233 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CCNKO75909 580 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR7C1O76099 320 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 NXPH2O95156 264 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 PTBP3O95758 552 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 RLN1P04808 185 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 IL5P05113 134 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 FCER2P06734 321 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 GRPP07492 148 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 HNRNPCP07910 306 aaKnown RBP eCLIP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SFTPBP07988 381 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ADH4P08319 380 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CTXN2P0C2S0 81 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 PGA5P0DJD9 388 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 PRKACAP17612 351 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CCKARP32238 428 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 HRH1P35367 487 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CFHR2P36980 270 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 MDH2P40926 338 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 NPBWR2P48146 333 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 KCNJ3P48549 501 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CCR6P51684 374 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SNU13P55769 128 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TAS2R31P59538 309 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ARPC4P59998 168 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 UBE2MP61081 183 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ERVS71-1P61550 626 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ERVK11-1P61568 191 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TSPAN5P62079 268 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 BSPH1Q075Z2 132 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SURF2Q15527 256 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TATDN3Q17R31 274 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SMIM21Q3B7S5 101 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ALKBH6Q3KRA9 238 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 PIGYQ3MUY2 71 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 VAX1Q5SQQ9 334 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 NCMAPQ5T1S8 102 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ATAD3CQ5T2N8 411 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SIGIRRQ6IA17 410 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SLC22A25Q6T423 547 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 IDO2Q6ZQW0 420 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 Q6ZS49 121 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 C6orf201Q7Z4U5 140 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZNF808Q8N4W9 903 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ZDHHC22Q8N966 263 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 POC1AQ8NBT0 407 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 BEST4Q8NFU0 473 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR2Z1Q8NG97 314 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR5AP2Q8NGF4 316 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR51S1Q8NGJ8 323 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 OR11L1Q8NGX0 322 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TERB2Q8NHR7 220 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 NEK7Q8TDX7 302 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SNAPC3Q92966 411 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 DVL3Q92997 716 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ERGIC1Q969X5 290 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 MRPL24Q96A35 216 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 DACT3Q96B18 629 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 UPRTQ96BW1 309 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 WFIKKN1Q96NZ8 548 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 CMSS1Q9BQ75 279 aaKnown RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 SULT4A1Q9BR01 284 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 NEURL2Q9BR09 285 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 GINS4Q9BRT9 223 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 FAAP24Q9BTP7 215 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 ST6GALNAC5Q9BVH7 336 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 TINAGL1Q9GZM7 467 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 EGLN1Q9GZT9 426 aa3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 FGF23Q9GZV9 251 aaPredicted RBP3.36□□□□□ -1.87
HMGB1P37-201ENST00000439613 C20orf85Q9H1P6 137 aa3.36□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms