RNA–Protein interactions for RNA: ENST00000428894.1

HMGB3P5-201, Transcript of high mobility group box 3 pseudogene 5, humanhuman

BASIC

Gene HMGB3P5, Length 612 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P5-201ENST00000428894 LBPP18428 481 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB3BP20337 219 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PVALBP20472 110 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PSMB1P20618 241 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DRD5P21918 477 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 UCP1P25874 307 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DPP4P27487 766 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DDTP30046 118 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 MARCKSL1P49006 195 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 NPY4RP50391 375 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB5CP51148 216 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 CCR6P51684 374 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 XKP51811 444 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 AQP4P55087 323 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 CTBP2P56545 445 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 CLDN18P56856 261 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RAB25P57735 213 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RBX1P62877 108 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 IGLV3-21P80748 117 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 BDH1Q02338 343 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 AQP6Q13520 282 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 GAMTQ14353 236 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 EBPQ15125 230 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 SGCBQ16585 318 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 MEP1BQ16820 701 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 C5orf64Q2M2E5 130 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PGGHGQ32M88 737 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 ADPRMQ3LIE5 342 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PHYHD1Q5SRE7 291 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DNLZQ5SXM8 178 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 AVPI1Q5T686 147 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 HIST2H2AA3Q6FI13 130 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PLET1Q6UQ28 207 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 SBSNQ6UWP8 590 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 STAC2Q6ZMT1 411 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 C17orf107Q6ZR85 190 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RASSF6Q6ZTQ3 369 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 Q6ZVQ6 151 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 NRARPQ7Z6K4 114 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 GALNT10Q86SR1 603 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 THOC6Q86W42 341 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PARP8Q8N3A8 854 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 FAM86B1Q8N7N1 296 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 STXBP6Q8NFX7 210 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR6K3Q8NGY3 331 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR6F1Q8NGZ6 308 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 OR2V1Q8NHB1 315 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DYNC2LI1Q8TCX1 351 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 MRAPQ8TCY5 172 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 CD200R1Q8TD46 325 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 C10orf105Q8TEF2 133 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 EEF1AKMT1Q8WVE0 214 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 ITLN1Q8WWA0 313 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 SELENOMQ8WWX9 145 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 DEDD2Q8WXF8 326 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PPWD1Q96BP3 646 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 HBEGFQ99075 208 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RNF2Q99496 336 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 NAA11Q9BSU3 229 aaPredicted RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 GGACTQ9BVM4 153 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 MRPL13Q9BYD1 178 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 COMMD4Q9H0A8 199 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RPF2Q9H7B2 306 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RNF122Q9H9V4 155 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 CBLN4Q9NTU7 201 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 SLCO1C1Q9NYB5 712 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PLEK2Q9NYT0 353 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 KLRF1Q9NZS2 232 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 RNF14Q9UBS8 474 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 UBQLN2Q9UHD9 624 aa3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PURGQ9UJV8 347 aaKnown RBP3.53□□□□□ -1.84
HMGB3P5-201ENST00000428894 PLCE1Q9P212 2302 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 A0A087WZY1 265 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 FBLL1A6NHQ2 334 aaKnown RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 C1orf196B1AJZ1 125 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 TRDCB7Z8K6 153 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 E5RGE8 158 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 H3BMQ9 156 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 K7EQM0 130 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC28A1O00337 649 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RNF13O43567 381 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 GGCTO75223 188 aaKnown RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 VAMP5O95183 116 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 GPR75O95800 540 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CYB5R3P00387 301 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CD8AP01732 235 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 NUDT17P0C025 328 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC35E2BP0CK96 405 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 SLC35E2P0CK97 266 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 HIST1H1TP22492 207 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 GLRA1P23415 457 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 GABRR1P24046 479 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 S100A2P29034 98 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 FCGR2BP31994 310 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 FCGR2CP31995 323 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 OTX1P32242 354 aaPredicted RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAS1LP35410 378 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 MAGEA3P43357 314 aa3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 RPS5P46782 204 aaKnown RBP3.52□□□□□ -1.85
HMGB3P5-201ENST00000428894 CRYBA2P53672 197 aa3.52□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms