RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 ZNF736B4DX44 427 aaPredicted RBP17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 SSX4O60224 188 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 MT-ND4P03905 459 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 PSG2P11465 335 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 HLA-DMAP28067 261 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 FAUP35544 74 aaKnown RBP17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 OR52W1Q6IF63 320 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 ENKURQ8TC29 256 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 CACNG6Q9BXT2 260 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 CHMP1AQ9HD42 196 aaPredicted RBP17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 C12orf4Q9NQ89 552 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 TMEM106BQ9NUM4 274 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 DCAF16Q9NXF7 216 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 ETAA1Q9NY74 926 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 ANAPC10Q9UM13 185 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 CHD6Q8TD26 2715 aa17.14■□□□□ 0.33
VCPKMT-202ENST00000395860 USP9XQ93008 2570 aaPredicted RBP17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 NAP1L6A6NFF2 107 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 IFNL4K9M1U5 179 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 CD3DP04234 171 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 LMO1P25800 156 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 PRDX2P32119 198 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 MICBQ29980 383 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 STEAP1BQ6NZ63 245 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 HOGA1Q86XE5 327 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 OCEL1Q9H607 264 aa17.13■□□□□ 0.33
VCPKMT-202ENST00000395860 FAM240BA0A1B0GVZ2 78 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 ZNF205O95201 554 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 TFF1P04155 84 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 FCGR3AP08637 254 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 COX6B1P14854 86 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 DTYMKP23919 212 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 GABRA2P47869 451 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 COL10A1Q03692 680 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 TLE4Q04727 773 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 SP5Q6BEB4 398 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 FAAP20Q6NZ36 180 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 CD177Q8N6Q3 437 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 BEST4Q8NFU0 473 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 MAFIPQ8WZ33 124 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 PPA2Q9H2U2 334 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 MCUBQ9NWR8 336 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 IGKV1D-17A0A075B6S4 117 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 OOEPA6NGQ2 149 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 TMEM178BH3BS89 294 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 SPNP16150 400 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 NAT1P18440 290 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 MDH2P40926 338 aaKnown RBP17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 HFEQ30201 348 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 OR4C16Q8NGL9 310 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 SNAPC3Q92966 411 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 CHST6Q9GZX3 395 aa17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 CLEC4MQ9H2X3 399 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 HRNRQ86YZ3 2850 aaPredicted RBP17.12■□□□□ 0.33
VCPKMT-202ENST00000395860 PSPNO60542 156 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 RAB3DO95716 219 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 MUC1P15941 1255 aaPredicted RBP17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 AMY2BP19961 511 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 SHEQ5VZ18 495 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 TEX36Q5VZQ5 186 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 CCBE1Q6UXH8 406 aaPredicted RBP17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 DEFB108BQ8NET1 73 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 OR4D10Q8NGI6 311 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 OR4K15Q8NH41 348 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 SEBOXQ9HB31 216 aaPredicted RBP17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 METRNQ9UJH8 293 aa17.11■□□□□ 0.33
VCPKMT-202ENST00000395860 DSCAMO60469 2012 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 PPIAL4EA0A075B759 164 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 PPIAL4DF5H284 164 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 M0QYG6 137 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 CD74P04233 296 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 PPIAL4FP0DN26 164 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 BTCP35070 178 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ATXN7L3Q14CW9 347 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ASCC1Q8N9N2 400 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ANGPTL6Q8NI99 470 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 NEU4Q8WWR8 484 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 RIMS4Q9H426 269 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 TMEM165Q9HC07 324 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ING3Q9NXR8 418 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 EDARQ9UNE0 448 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 PPIAL4AQ9Y536 164 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 NAPSAO96009 420 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 GIFP27352 417 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 SLC6A1P30531 599 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 HRH1P35367 487 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 RNASE10Q5GAN6 216 aaKnown RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ZNF782Q6ZMW2 699 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 TINAGL1Q9GZM7 467 aaPredicted RBP17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 DPAGT1Q9H3H5 408 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 ZNF222Q9UK12 451 aa17.1■□□□□ 0.33
VCPKMT-202ENST00000395860 TRAV38-1A0A0B4J264 116 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 LGALS8O00214 317 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 PMP2P02689 132 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 TBPP20226 339 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 MEF2DQ14814 521 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 ACTBL2Q562R1 376 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 STUMQ69YW2 141 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 GLCCI1Q86VQ1 547 aa17.09■□□□□ 0.33
VCPKMT-202ENST00000395860 PLPPR1Q8TBJ4 325 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms