RNA–Protein interactions for RNA: ENST00000369259.4

CHD1L-203, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 1 (best) BASIC

Gene CHD1L, Length 2,358 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-203ENST00000369259 FUT9Q9Y231 359 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 C3orf85A0A1B0GTC6 90 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 SHISA7A6NL88 538 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 SEMA4FO95754 770 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 MTCP1P56278 107 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 ZNF154Q13106 437 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 DMRTA1Q5VZB9 504 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 PCGF1Q9BSM1 259 aa14.04□□□□□ -0.16
CHD1L-203ENST00000369259 RER1O15258 196 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 TMEM50AO95807 157 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 CTHP32929 405 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 GNB2P62879 340 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 PLCXD2Q0VAA5 305 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 THEM4Q5T1C6 240 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 Q9N2K0 584 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 PRSS50Q9UI38 385 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 TMEM131Q92545 1883 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 E9PLN8 166 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 IGKV3-11P04433 115 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 IRF2P14316 349 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 CDAP32320 146 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 IL24Q13007 206 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 LCN15Q6UWW0 184 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 CENPVQ7Z7K6 275 aaPredicted RBP14.03□□□□□ -0.16
CHD1L-203ENST00000369259 OR2V1Q8NHB1 315 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 MBD3L1Q8WWY6 194 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 ZNF385AQ96PM9 386 aaKnown RBP14.03□□□□□ -0.16
CHD1L-203ENST00000369259 MRPL13Q9BYD1 178 aaKnown RBP14.03□□□□□ -0.16
CHD1L-203ENST00000369259 TMEM222Q9H0R3 208 aa14.03□□□□□ -0.16
CHD1L-203ENST00000369259 PNRC2Q9NPJ4 139 aaKnown RBP14.03□□□□□ -0.16
CHD1L-203ENST00000369259 ARHGEF17Q96PE2 2063 aaPredicted RBP14.03□□□□□ -0.16
CHD1L-203ENST00000369259 CEBPZOSA8MTT3 80 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 H7BYZ3 331 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 MPPED1O15442 326 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 HPRT1P00492 218 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 GNG10P50151 68 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 TMEM241Q24JQ0 296 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 ZNF695Q8IW36 515 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 ZNF721Q8TF20 911 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 LYZL4Q96KX0 146 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 DIRC2Q96SL1 478 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 NUDT22Q9BRQ3 303 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 AGMATQ9BSE5 352 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 LPAR2Q9HBW0 351 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 ASCL3Q9NQ33 180 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 RPRMQ9NS64 109 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 TBX21Q9UL17 535 aa14.02□□□□□ -0.16
CHD1L-203ENST00000369259 C5orf63A6NC05 138 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 CTSEP14091 401 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 BSXQ3C1V8 233 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 HLA-DQA1Q5Y7H0 255 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 CYP2G1PQ6ZSU1 146 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 MRGPRGQ86SM5 289 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 PIGTQ969N2 578 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 PGAM5Q96HS1 289 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 ZNF845Q96IR2 970 aaPredicted RBP14.02□□□□□ -0.17
CHD1L-203ENST00000369259 BMFQ96LC9 184 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 SMIM7Q9BQ49 75 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 RRAGCQ9HB90 399 aa14.02□□□□□ -0.17
CHD1L-203ENST00000369259 PTRH2Q9Y3E5 179 aaKnown RBP14.02□□□□□ -0.17
CHD1L-203ENST00000369259 CCDC163A0A0D9SF12 145 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 ADAM20O43506 726 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 HRASP01112 189 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 IFNA5P01569 189 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 BRS3P32247 399 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 FGF8P55075 233 aaPredicted RBP14.01□□□□□ -0.17
CHD1L-203ENST00000369259 CLRN1P58418 232 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 HERV-K104P61576 105 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 ID3Q02535 119 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 SHHQ15465 462 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 SLC25A24Q6NUK1 477 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 TMEM234Q8WY98 164 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 FAM131CQ96AQ9 280 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 TMEM56Q96MV1 263 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 UBE2J1Q9Y385 318 aaPredicted RBP14.01□□□□□ -0.17
CHD1L-203ENST00000369259 TMEM56-RWDD3S4R434 201 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 USP34Q70CQ2 3546 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 A0A1W2PPQ1 181 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 IFNL4K9M1U5 179 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 DDAH2O95865 285 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 FAHP16930 419 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 MFAP5Q13361 173 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 SLC37A2Q8TED4 501 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 PP6455Q8WZ26 134 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 RIMS4Q9H426 269 aaPredicted RBP14.01□□□□□ -0.17
CHD1L-203ENST00000369259 SERINC1Q9NRX5 453 aa14.01□□□□□ -0.17
CHD1L-203ENST00000369259 ZNF705FA8MVS1 300 aaPredicted RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 TNFRSF10CO14798 259 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 CHST1O43916 411 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 HLA-HP01893 362 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 ZNF705DP0CH99 300 aaPredicted RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 ZNF705BP0CI00 300 aaPredicted RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 AADACP22760 399 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 CNN1P51911 297 aaKnown RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 GRB2P62993 217 aaKnown RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 ZNF726P1Q15940 193 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 CLEC12BQ2HXU8 276 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 SELENOHQ8IZQ5 122 aaKnown RBP14□□□□□ -0.17
CHD1L-203ENST00000369259 WFIKKN1Q96NZ8 548 aa14□□□□□ -0.17
CHD1L-203ENST00000369259 SIGLEC12Q96PQ1 595 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms