RNA–Protein interactions for RNA: ENST00000321356.8

CLK1-201, Transcript of CDC like kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK1, Length 1,888 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-201ENST00000321356 YRDCQ86U90 279 aaKnown RBP7.5□□□□□ -1.21
CLK1-201ENST00000321356 OR2C3Q8N628 320 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 HSD17B11Q8NBQ5 300 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 CLEC18CQ8NCF0 446 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 OR1J1Q8NGS3 322 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 SEBOXQ9HB31 216 aaPredicted RBP7.5□□□□□ -1.21
CLK1-201ENST00000321356 GPR35Q9HC97 309 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 FSCN3Q9NQT6 498 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 METTL1Q9UBP6 276 aaKnown RBP7.5□□□□□ -1.21
CLK1-201ENST00000321356 WDFY3Q8IZQ1 3526 aa7.5□□□□□ -1.21
CLK1-201ENST00000321356 IGSF23A1L1A6 192 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NKX2-6A6NCS4 301 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 ZNF587BE7ETH6 402 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 RPL36A-HNRNPH2H7BZ11 118 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 M0R036 132 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NTN3O00634 580 aaPredicted RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 CXCL13O43927 109 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 OR7C1O76099 320 aaPredicted RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 NAPSAO96009 420 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 IGHV2-5P01817 119 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 RAB5AP20339 215 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NPBWR2P48146 333 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 RGS19P49795 217 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 CLDN15P56746 228 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 RAB1AP62820 205 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 TRA2AQ13595 282 aaKnown RBP eCLIP7.49□□□□□ -1.212e-9■■■■□ 22.8
CLK1-201ENST00000321356 ZNF266Q14584 549 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PDCD1Q15116 288 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NRN1LQ496H8 165 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 MEX3BQ6ZN04 569 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 TMEM182Q6ZP80 229 aaPredicted RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 DPPA2Q7Z7J5 298 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 ZNF611Q8N823 705 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 OR2V1Q8NHB1 315 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SNIP1Q8TAD8 396 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 ISOC2Q96AB3 205 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 YPEL4Q96NS1 127 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SPIN2AQ99865 258 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SPIN2BQ9BPZ2 258 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PRDM14Q9GZV8 571 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 ZNF442Q9H7R0 627 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 KCNJ16Q9NPI9 418 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PARPBPQ9NWS1 579 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 P4HTMQ9NXG6 502 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PILRBQ9UKJ0 227 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 FBXO7Q9Y3I1 522 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 FRYLO94915 3013 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 A0A1W2PPE3 182 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 DUXBA0A1W2PPF3 345 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 FAM24AA6NFZ4 105 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 TUSC2O75896 110 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 CCL4P13236 92 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 DAOP14920 347 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 ATP6V0CP27449 155 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NKX2-1P43699 371 aaPredicted RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 SULT1A1P50225 295 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NOVA1P51513 510 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 ZFP36L1Q07352 338 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 CLINT1Q14677 625 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 TGIF1Q15583 401 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 NMSQ5H8A3 153 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PMS2CLQ68D20 193 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SPSB3Q6PJ21 355 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SLC25A26Q70HW3 274 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 ODF3L1Q8IXM7 274 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SAXO1Q8IYX7 474 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SELENOHQ8IZQ5 122 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 NAXEQ8NCW5 288 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 CPEB3Q8NE35 698 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 OR10D3Q8NH80 312 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 OR14L1PQ8NHC6 308 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 FAM213BQ8TBF2 198 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 TMEM171Q8WVE6 324 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 PIGCQ92535 297 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 EXTL1Q92935 676 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 C20orf24Q9BUV8 137 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 HIPK2Q9H2X6 1198 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 Q9N2K0 584 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 SLC7A10Q9NS82 523 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 LYRM2Q9NU23 88 aaPredicted RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 FAM86C1Q9NVL1 165 aa7.49□□□□□ -1.21
CLK1-201ENST00000321356 MRPS18CQ9Y3D5 142 aaKnown RBP7.49□□□□□ -1.21
CLK1-201ENST00000321356 TNRC6AQ8NDV7 1962 aaKnown RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 BTBD17A6NE02 478 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 ZNF724A8MTY0 619 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 ZNF732B4DXR9 585 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 CYTIPO60759 359 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 P04436 131 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 S100A6P06703 90 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 RFPL3SP0C7P2 107 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 MMP9P14780 707 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 UCP1P25874 307 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 FOLR3P41439 243 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 POLR2GP62487 172 aaKnown RBP eCLIP7.48□□□□□ -1.21
CLK1-201ENST00000321356 FOXO1Q12778 655 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 HIKESHIQ53FT3 197 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 LCE2DQ5TA82 110 aaPredicted RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 RBMS3Q6XE24 437 aaKnown RBP7.48□□□□□ -1.21
CLK1-201ENST00000321356 TBC1D26Q86UD7 250 aa7.48□□□□□ -1.21
CLK1-201ENST00000321356 WDR5BQ86VZ2 330 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms