RNA–Protein interactions for RNA: ENST00000303407.11

BRD3-201, Transcript of bromodomain containing 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRD3, Length 5,652 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-201ENST00000303407 VMA21Q3ZAQ7 101 aa14.33□□□□□ -0.11
BRD3-201ENST00000303407 CTHRC1Q96CG8 243 aa14.33□□□□□ -0.11
BRD3-201ENST00000303407 ONECUT1Q9UBC0 465 aa14.33□□□□□ -0.11
BRD3-201ENST00000303407 SCN3AQ9NY46 2000 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 CLEC3BP05452 202 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 OR5D13Q8NGL4 314 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 HDHD3Q9BSH5 251 aaPredicted RBP14.33□□□□□ -0.12
BRD3-201ENST00000303407 SLC35B3Q9H1N7 401 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 C7orf66A4D0T2 115 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 DNPH1O43598 174 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 HRASP01112 189 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 MPGP29372 298 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 ARL16Q0P5N6 197 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 BVESQ8NE79 360 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 TTTY12Q9BZ98 90 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 SF3B6Q9Y3B4 125 aaKnown RBP14.33□□□□□ -0.12
BRD3-201ENST00000303407 WSB1Q9Y6I7 421 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 PRSS44E7EML9 344 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 PPYP01298 95 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 CT45A10P0DMU9 189 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 VSIG10L2P0DP72 767 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 DCAF10Q5QP82 559 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 HOGA1Q86XE5 327 aa14.33□□□□□ -0.12
BRD3-201ENST00000303407 MAP1LC3B2A6NCE7 125 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 PMELP40967 661 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 LRFN3Q9BTN0 628 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 MAP1LC3BQ9GZQ8 125 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 A0A0J9YW62 118 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 CHEK1O14757 476 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 UPK3AO75631 287 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 TMEM211Q6ICI0 200 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 IGLV1-36A0A0B4J1U3 117 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 IGHV3-13P01766 116 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 IGHV3-7P01780 117 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 HLA-DQB1P01920 261 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 KCNK17Q96T54 332 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 C12orf57Q99622 126 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 ZNF835Q9Y2P0 537 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 OOEPA6NGQ2 149 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 CDIPTO14735 213 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 FGF2P09038 288 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 GINS3Q9BRX5 216 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 CCL28Q9NRJ3 127 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 IGKV1D-42A0A075B6H8 117 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 RPL36A-HNRNPH2H7BZ11 118 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 PRR27Q6MZM9 219 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 FAM219AQ8IW50 185 aa14.32□□□□□ -0.12
BRD3-201ENST00000303407 NQO2P16083 231 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 FGF8P55075 233 aaPredicted RBP14.31□□□□□ -0.12
BRD3-201ENST00000303407 IL24Q13007 206 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 PLAC9Q5JTB6 97 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 TMEM108Q6UXF1 575 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 ATP5SQ99766 215 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 SLC2A9Q9NRM0 540 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 ZNF737O75373 536 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 S100A8P05109 93 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 TIMM9Q9Y5J7 89 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 NYNRINQ9P2P1 1898 aaKnown RBP14.31□□□□□ -0.12
BRD3-201ENST00000303407 B4E171 279 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 MS4A18H0YCH9 400 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 SOX15O60248 233 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 TSPAN7P41732 249 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 FABP9Q0Z7S8 132 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 MS4A18Q3C1V0 323 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 MOGAT2Q3SYC2 334 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 CCL17Q92583 94 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 ANGPTL4Q9BY76 406 aa14.31□□□□□ -0.12
BRD3-201ENST00000303407 LMX1BO60663 402 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 SAT2Q96F10 170 aaPredicted RBP14.3□□□□□ -0.12
BRD3-201ENST00000303407 CLCF1Q9UBD9 225 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 SP1P08047 785 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 CD200P41217 278 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 CNN1P51911 297 aaKnown RBP14.3□□□□□ -0.12
BRD3-201ENST00000303407 MPV17LQ2QL34 196 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 TMEM56Q96MV1 263 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 GAL3ST2Q9H3Q3 398 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 TINAGQ9UJW2 476 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 A0A1W2PNV4 684 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 LINC00862A6NCI5 91 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 IGLV3-21P80748 117 aaPredicted RBP14.3□□□□□ -0.12
BRD3-201ENST00000303407 ROM1Q03395 351 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 ZNF154Q13106 437 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 SLC25A22Q9H936 323 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 SERTM2A0A1B0GWG4 89 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 CYTIPO60759 359 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 ERVFC1-1P60608 527 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 LYZL2Q7Z4W2 148 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 CHST1O43916 411 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 HLA-DRB3P79483 266 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 FOXO1Q12778 655 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 FAM27BQ5VT28 67 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 OR5A2Q8NGI9 324 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 ZNF519Q8TB69 540 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 TMEM147Q9BVK8 224 aa14.3□□□□□ -0.12
BRD3-201ENST00000303407 A0A0U1RQV5 110 aa14.29□□□□□ -0.12
BRD3-201ENST00000303407 LINC00596Q86U02 117 aa14.29□□□□□ -0.12
BRD3-201ENST00000303407 MDP1Q86V88 176 aa14.29□□□□□ -0.12
BRD3-201ENST00000303407 OR10G4Q8NGN3 311 aa14.29□□□□□ -0.12
BRD3-201ENST00000303407 OR10G9Q8NGN4 311 aa14.29□□□□□ -0.12
BRD3-201ENST00000303407 OR10G7Q8NGN6 311 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms