RNA–Protein interactions for RNA: ENST00000600196.1

TGFB1-204, Transcript of transforming growth factor beta 1, humanhuman

TSL 5

Gene TGFB1, Length 399 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB1-204ENST00000600196 SERPINA2P20848 420 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 GATA3P23771 443 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 LMO4P61968 165 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 UNC119Q13432 240 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 P2RY14Q15391 338 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 Q6P435 159 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 TMEM104Q8NE00 496 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 NDNFQ8TB73 568 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 C15orf40Q8WUR7 153 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 FAM46BQ96A09 425 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 SELENOIQ9C0D9 397 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 LPAR5Q9H1C0 372 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.25□□□□□ -0.77
TGFB1-204ENST00000600196 DIABLOQ9NR28 239 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 DCAF16Q9NXF7 216 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 ADAM30Q9UKF2 790 aa10.25□□□□□ -0.77
TGFB1-204ENST00000600196 CCDC168Q8NDH2 2452 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 TRBV23-1A0A0A0MS06 115 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ISPDA4D126 451 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 WNT9BO14905 357 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 TMPRSS2O15393 492 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ADAM20O43506 726 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ZNF737O75373 536 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 MPIG6BO95866 241 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 RPS2P15880 293 aaKnown RBP10.24□□□□□ -0.77
TGFB1-204ENST00000600196 AMY2BP19961 511 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 CD80P33681 288 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 PITPNBP48739 271 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 GZMKP49863 264 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 MEF2CQ06413 473 aaPredicted RBP10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ESCO2Q56NI9 601 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 SFRP4Q6FHJ7 346 aaPredicted RBP10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ZNF554Q86TJ5 538 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 OR8H2Q8N162 312 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 CD177Q8N6Q3 437 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 BOLLQ8N9W6 283 aaKnown RBP10.24□□□□□ -0.77
TGFB1-204ENST00000600196 DEFB108BQ8NET1 73 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 CLDND2Q8NHS1 167 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 C8orf46Q8TAG6 207 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 PHF21AQ96BD5 680 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 S100A16Q96FQ6 103 aaKnown RBP10.24□□□□□ -0.77
TGFB1-204ENST00000600196 Q96MF0 132 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 ZNF488Q96MN9 340 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 GAFA1Q96PS6 74 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 NEDD4LQ96PU5 975 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 BARHL1Q9BZE3 327 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 MAB21L2Q9Y586 359 aa10.24□□□□□ -0.77
TGFB1-204ENST00000600196 A0A1W2PPH5 198 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 FOXI3A8MTJ6 420 aaPredicted RBP10.23□□□□□ -0.77
TGFB1-204ENST00000600196 SERPINE3A8MV23 424 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 B4DSR2 109 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 MCRIP1C9JLW8 97 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 PDCD6O75340 191 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 OR7C1O76099 320 aaPredicted RBP10.23□□□□□ -0.77
TGFB1-204ENST00000600196 OR2H2O95918 312 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 GYPAP02724 150 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 TK1P04183 234 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 SLC2A2P11168 524 aaPredicted RBP10.23□□□□□ -0.77
TGFB1-204ENST00000600196 TGFBR1P36897 503 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 MNDAP41218 407 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 GABRA2P47869 451 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 IKZF1Q13422 519 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 TAF9Q16594 264 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 UBE2NLQ5JXB2 153 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 FAM201AQ5SY85 155 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 ZNF841Q6ZN19 808 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 C1orf122Q6ZSJ8 110 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 GAPTQ8N292 157 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 OR10K1Q8NGX5 313 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 SLIRPQ9GZT3 109 aaKnown RBP10.23□□□□□ -0.77
TGFB1-204ENST00000600196 RHBDL2Q9NX52 303 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 CLN8Q9UBY8 286 aa10.23□□□□□ -0.77
TGFB1-204ENST00000600196 IGHV4-61A0A0C4DH41 118 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 RAB27BO00194 218 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SLC33A1O00400 549 aaPredicted RBP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 GEMIN2O14893 280 aaKnown RBP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 CLPXO76031 633 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 GSTP1P09211 210 aaKnown RBP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 ZNF44P15621 663 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 CHATP28329 748 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 CLDN12P56749 244 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 PITPNAQ00169 270 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 COL10A1Q03692 680 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SRSF7Q16629 238 aaKnown RBP eCLIP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 PNLIPRP3Q17RR3 467 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 AVPI1Q5T686 147 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 WDR25Q64LD2 544 aaPredicted RBP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SLC35E4Q6ICL7 350 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 BAIAP2L2Q6UXY1 529 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 C17orf107Q6ZR85 190 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 Q6ZTK2 550 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 OR10R2Q8NGX6 335 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 LGALS14Q8TCE9 139 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 CORO2AQ92828 525 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 CCL13Q99616 98 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SSBP3Q9BWW4 388 aaPredicted RBP10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SHARPINQ9H0F6 387 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 BANF2Q9H503 90 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 RAB9BQ9NP90 201 aa10.22□□□□□ -0.77
TGFB1-204ENST00000600196 SLC25A10Q9UBX3 287 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms